PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PDK_30s674441g001
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Coryphoideae; Phoeniceae; Phoenix
Family FAR1
Protein Properties Length: 573aa    MW: 63568.5 Da    PI: 9.3799
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PDK_30s674441g001genomePDKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR190.72e-2836125288
               FAR1   2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk...tekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHe 88 
                        fY +YA++vGF++r+s+ ++s+r+++i++r+ vCskeg+re+  ++    e+++r+ra+tr+gCka+++vkk   +kw vtk+++eHnH 
  PDK_30s674441g001  36 FYAAYAERVGFRIRISRYTRSRRDNSIISRRIVCSKEGFRESCANEglsGERRQRQRAVTRVGCKAMIMVKKLGPEKWIVTKFVKEHNHG 125
                        9*****************************************9999998899999**********************************5 PP

2FAR189.35.5e-28173265290
               FAR1   2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk....tekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHel 89 
                        fY +YA+++GF+ r+sk  +s+r+++i++r+ vCskeg+re + k+    + k +r+r+ tr+gCka++ vk+ ++gkw+vtk+e+eHnH+l
  PDK_30s674441g001 173 FYIAYARHMGFRARISKYCRSRRDNSIISRQIVCSKEGFREVRVKNeitdEGKIKRPRVITRIGCKAMIIVKRANSGKWVVTKFEKEHNHDL 264
                        9******************************************9999998889999**********************************99 PP

               FAR1  90 a 90 
                         
  PDK_30s674441g001 265 K 265
                        5 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF031013.0E-2536125IPR004330FAR1 DNA binding domain
PfamPF031011.2E-25173265IPR004330FAR1 DNA binding domain
Sequence ? help Back to Top
Protein Sequence    Length: 573 aa     Download sequence    Send to blast
MMQNPDKGEI IASGGDTDAE PYEGMEFESE EAARTFYAAY AERVGFRIRI SRYTRSRRDN  60
SIISRRIVCS KEGFRESCAN EGLSGERRQR QRAVTRVGCK AMIMVKKLGP EKWIVTKFVK  120
EHNHGPVPPR RVEVRTVRRN DDFLVQSYTS DGGAVQEPFE GMEFESEDAA KTFYIAYARH  180
MGFRARISKY CRSRRDNSII SRQIVCSKEG FREVRVKNEI TDEGKIKRPR VITRIGCKAM  240
IIVKRANSGK WVVTKFEKEH NHDLKMPNLE SHSNSGEVIN LQGAIMKANG MVMDESSART  300
QGTSQESLCV LYNQLCYEAI RYAQEGAATE DSYNVAMSAL KEAAEKVAAA KKAAVNVGQQ  360
GLHIGGAKQA FLVVHPAQTK ALKDLQCLNE VKQVPLILNI ANSQLLHNPS DVVHAAHATQ  420
VLNITNAVSV LKQSLPSTPP MEGLIGNGLQ GSDLPEEMKM SVQTVDKDVE LDSTIQKRRC  480
QCRQWIKMWS LIPPSRNLRG YNSVKKLGSP YQFSINNLDS TNAAKADFTP RSGNNLTSPG  540
SSEAQPVAIP AVPVTLYVPV MGSLPTSCSG CCQ
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_026656633.10.0uncharacterized protein LOC103696283
RefseqXP_026656634.10.0uncharacterized protein LOC103696283
TrEMBLA0A2H3ZHL70.0A0A2H3ZHL7_PHODC; uncharacterized protein LOC103696283
STRINGXP_008776072.10.0(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP90313345
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G07500.12e-34FAR1 family protein