PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PDK_30s664641g001
Organism
Phoenix dactylifera
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Coryphoideae; Phoeniceae; Phoenix
Family bHLH
Protein Properties Length: 325aa    MW: 35847.3 Da    PI: 6.1729
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PDK_30s664641g001genomePDKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH41.72.1e-13119170155
                        CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                HLH   1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                        +r+ h ++Er+RR+++N+ ++ Lr+l+P++   + ++ + a+i   A++Y+k+L+
  PDK_30s664641g001 119 QRMIHIAVERNRRKQMNEYLAVLRSLMPPS---YVQRGDQASIIGGAINYVKELE 170
                        6999**************************...9******************996 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:4.10.280.109.1E-14117174IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000833.15E-14117174No hitNo description
PROSITE profilePS5088815.726118169IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474591.96E-17118184IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.4E-10119170IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003532.2E-11124175IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 325 aa     Download sequence    Send to blast
MALEAVVFPQ NTFGYYTCKE RYAMGGGAWG YDFEGVGEEQ KKVEALECEL GGKVGGNWDP  60
TSSSLVQNLK EWDANSSLLE ACEGTALEGE AKEAAAAAAG RRKRRRAKSV KNKEEVESQR  120
MIHIAVERNR RKQMNEYLAV LRSLMPPSYV QRGDQASIIG GAINYVKELE QLLQSLEVQK  180
RLKQRSDATD LTPPFADFFA FPQYSSCSSG SSSGTHTSSS SSSNANEVAA KNRSAMADIE  240
VTMVETHANL KVLSRRRPNQ LLKMVVGLQS TGLTTLHLNV TTVDRLVLYS FSLKVEDDCQ  300
FTSVDEIATA AYQMLGRIQE EANFN
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1101105RKRRR
2119130RMIHIAVERNRR
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008782180.10.0transcription factor bHLH94-like
TrEMBLA0A2H3XDR60.0A0A2H3XDR6_PHODC; transcription factor bHLH94-like
STRINGXP_008782180.10.0(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP74138156
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G72210.18e-70bHLH family protein