PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PDK_30s663101g009
Organism
Phoenix dactylifera
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Coryphoideae; Phoeniceae; Phoenix
Family HB-other
Protein Properties Length: 284aa    MW: 32109.7 Da    PI: 4.9042
Description HB-other family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PDK_30s663101g009genomePDKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox27.74.7e-09211262253
                        T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHH CS
           Homeobox   2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRa 53 
                        ++  +++k q+e+Le+++ +++ p+ +++  + + ++L+ + V  WF  +R 
  PDK_30s663101g009 211 KPEKRLKKVQVETLERVYSRTKRPTNAMISSIVHVTNLPWKTVVKWFEDKRL 262
                        56778999****************************************9996 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.601.5E-8206261IPR009057Homeodomain-like
PROSITE profilePS500719.507207267IPR001356Homeobox domain
SMARTSM003892.6E-4209271IPR001356Homeobox domain
SuperFamilySSF466893.12E-9210273IPR009057Homeodomain-like
PfamPF000461.2E-6211262IPR001356Homeobox domain
CDDcd000867.07E-6211261No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0002229Biological Processdefense response to oomycetes
GO:0009414Biological Processresponse to water deprivation
GO:0009682Biological Processinduced systemic resistance
GO:0009787Biological Processregulation of abscisic acid-activated signaling pathway
GO:0010118Biological Processstomatal movement
GO:0050832Biological Processdefense response to fungus
GO:2000022Biological Processregulation of jasmonic acid mediated signaling pathway
GO:2000071Biological Processregulation of defense response by callose deposition
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 284 aa     Download sequence    Send to blast
MAAPACPPFL VLRVFSASWG PPHGGSSSGR RLFASTSIPS SPALLRGSYL RSSTVALARR  60
RKNASTAQPS KHEKMLQNDE QEEEEREEED IDEDALEALF SQLEEDLKND SLSDDGADDE  120
ITEEDMARLE EELEEALGDG DYDDLSRVPA DNLDSDDKSD QEETRPKLKN WQMRRLARAL  180
KIGRLTQTPS VSGNKQWEYP PMTAVNAAKS KPEKRLKKVQ VETLERVYSR TKRPTNAMIS  240
SIVHVTNLPW KTVVKWFEDK RLQDGVPEHR VPYRRSTPET ISTS
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010914896.11e-148protein OVEREXPRESSOR OF CATIONIC PEROXIDASE 3
RefseqXP_010914898.11e-148protein OVEREXPRESSOR OF CATIONIC PEROXIDASE 3
TrEMBLA0A426ZMX81e-71A0A426ZMX8_ENSVE; Uncharacterized protein
STRINGOB06G27850.14e-61(Oryza brachyantha)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP107003542
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G11270.11e-23overexpressor of cationic peroxidase 3