PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PDK_30s661971g001 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Coryphoideae; Phoeniceae; Phoenix
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Family | CAMTA | ||||||||
Protein Properties | Length: 182aa MW: 21279.7 Da PI: 8.7972 | ||||||||
Description | CAMTA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | CG-1 | 47.6 | 3.1e-15 | 2 | 37 | 46 | 78 |
CG-1 46 kvryfrkDGyswkkkkdgktvrEdhekLKvgg...v 78 ++ryfrkDG++w+kkkdgktv+E+he+LK + + PDK_30s661971g001 2 VLRYFRKDGHNWRKKKDGKTVKEAHERLKFLSqilI 37 78***************************8764441 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51437 | 26.579 | 1 | 108 | IPR005559 | CG-1 DNA-binding domain |
SMART | SM01076 | 7.0E-5 | 1 | 103 | IPR005559 | CG-1 DNA-binding domain |
Pfam | PF03859 | 3.8E-11 | 2 | 37 | IPR005559 | CG-1 DNA-binding domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 182 aa Download sequence Send to blast |
MVLRYFRKDG HNWRKKKDGK TVKEAHERLK FLSQILIDYM LKSNLREHVD AGFDEERIND 60 YNRVSRQFPR EVSGKNAPYM ARNQPKAWRD YMHIVLVHYL GVKPFETNLS SIGHDLLFIF 120 LFLECVCFLI TEPELDISLT WAFLTVCFPV TEPELGTQIL SSPKKAKLDF GRMGAPSQVL 180 IE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G64220.2 | 3e-15 | Calmodulin-binding transcription activator protein with CG-1 and Ankyrin domains |