PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PDK_30s661191g015
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Coryphoideae; Phoeniceae; Phoenix
Family G2-like
Protein Properties Length: 264aa    MW: 29471.1 Da    PI: 8.7093
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PDK_30s661191g015genomePDKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like98.45.2e-3192146155
            G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                        k+r+rWt+eLHe+Fveav++LGG+ kAtPk il lmk +gLt+ h+kSHLQkYR+
  PDK_30s661191g015  92 KQRIRWTHELHEQFVEAVNHLGGAMKATPKGILALMKSQGLTIFHIKSHLQKYRT 146
                        79****************************************************8 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS512949.77689149IPR017930Myb domain
Gene3DG3DSA:1.10.10.605.2E-2890147IPR009057Homeodomain-like
SuperFamilySSF466891.08E-1591146IPR009057Homeodomain-like
TIGRFAMsTIGR015572.7E-2492147IPR006447Myb domain, plants
PfamPF002492.3E-896145IPR001005SANT/Myb domain
PfamPF143793.9E-19179224IPR025756MYB-CC type transcription factor, LHEQLE-containing domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 264 aa     Download sequence    Send to blast
MTNFNYESSG KSDAPSSIYF PTDCQAQNND NVGILQSKST SLEHACTANN SDLSWREVGG  60
SKHGEMLYSS NSRIGTTAVH SSMQSGGAAT GKQRIRWTHE LHEQFVEAVN HLGGAMKATP  120
KGILALMKSQ GLTIFHIKSH LQKYRTAKCM PNFLGGKNGK RINNDMLPLS NFRGYAGLQI  180
SETLRLQMDV QKSLHDHLEF QKKLQMRIEE HANYLERMFD QQKRSCSFLE NHNSANAVDQ  240
SIIGCSSNGE YENSKEAILA KREP
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6j4k_A4e-2491148158Protein PHOSPHATE STARVATION RESPONSE 1
6j4k_B4e-2491148158Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_A4e-2491148158Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_C4e-2491148158Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_D4e-2491148158Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_F4e-2491148158Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_H4e-2491148158Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_J4e-2491148158Protein PHOSPHATE STARVATION RESPONSE 1
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor involved in phosphate starvation signaling. Binds to P1BS, an imperfect palindromic sequence 5'-GNATATNC-3', to promote the expression of inorganic phosphate (Pi) starvation-responsive genes. Functionally redundant with PHR2 and PHR3 in regulating Pi starvation response and Pi homeostasis. {ECO:0000250|UniProtKB:Q10LZ1}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008784667.10.0protein PHOSPHATE STARVATION RESPONSE 1-like isoform X1
RefseqXP_008784669.10.0protein PHOSPHATE STARVATION RESPONSE 1-like isoform X3
SwissprotB8ANX91e-46PHR1_ORYSI; Protein PHOSPHATE STARVATION RESPONSE 1
SwissprotQ9SJW01e-47PHL7_ARATH; Myb family transcription factor PHL7
TrEMBLA0A2H3XJD10.0A0A2H3XJD1_PHODC; protein PHOSPHATE STARVATION RESPONSE 1-like isoform X3
TrEMBLA0A2H3XJG50.0A0A2H3XJG5_PHODC; protein PHOSPHATE STARVATION RESPONSE 1-like isoform X1
STRINGXP_008784667.10.0(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP5078522
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G01060.15e-50G2-like family protein