PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PDK_30s661191g015 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Coryphoideae; Phoeniceae; Phoenix
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Family | G2-like | ||||||||
Protein Properties | Length: 264aa MW: 29471.1 Da PI: 8.7093 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 98.4 | 5.2e-31 | 92 | 146 | 1 | 55 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 k+r+rWt+eLHe+Fveav++LGG+ kAtPk il lmk +gLt+ h+kSHLQkYR+ PDK_30s661191g015 92 KQRIRWTHELHEQFVEAVNHLGGAMKATPKGILALMKSQGLTIFHIKSHLQKYRT 146 79****************************************************8 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51294 | 9.776 | 89 | 149 | IPR017930 | Myb domain |
Gene3D | G3DSA:1.10.10.60 | 5.2E-28 | 90 | 147 | IPR009057 | Homeodomain-like |
SuperFamily | SSF46689 | 1.08E-15 | 91 | 146 | IPR009057 | Homeodomain-like |
TIGRFAMs | TIGR01557 | 2.7E-24 | 92 | 147 | IPR006447 | Myb domain, plants |
Pfam | PF00249 | 2.3E-8 | 96 | 145 | IPR001005 | SANT/Myb domain |
Pfam | PF14379 | 3.9E-19 | 179 | 224 | IPR025756 | MYB-CC type transcription factor, LHEQLE-containing domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 264 aa Download sequence Send to blast |
MTNFNYESSG KSDAPSSIYF PTDCQAQNND NVGILQSKST SLEHACTANN SDLSWREVGG 60 SKHGEMLYSS NSRIGTTAVH SSMQSGGAAT GKQRIRWTHE LHEQFVEAVN HLGGAMKATP 120 KGILALMKSQ GLTIFHIKSH LQKYRTAKCM PNFLGGKNGK RINNDMLPLS NFRGYAGLQI 180 SETLRLQMDV QKSLHDHLEF QKKLQMRIEE HANYLERMFD QQKRSCSFLE NHNSANAVDQ 240 SIIGCSSNGE YENSKEAILA KREP |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
6j4k_A | 4e-24 | 91 | 148 | 1 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4k_B | 4e-24 | 91 | 148 | 1 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_A | 4e-24 | 91 | 148 | 1 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_C | 4e-24 | 91 | 148 | 1 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_D | 4e-24 | 91 | 148 | 1 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_F | 4e-24 | 91 | 148 | 1 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_H | 4e-24 | 91 | 148 | 1 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_J | 4e-24 | 91 | 148 | 1 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
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Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcription factor involved in phosphate starvation signaling. Binds to P1BS, an imperfect palindromic sequence 5'-GNATATNC-3', to promote the expression of inorganic phosphate (Pi) starvation-responsive genes. Functionally redundant with PHR2 and PHR3 in regulating Pi starvation response and Pi homeostasis. {ECO:0000250|UniProtKB:Q10LZ1}. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_008784667.1 | 0.0 | protein PHOSPHATE STARVATION RESPONSE 1-like isoform X1 | ||||
Refseq | XP_008784669.1 | 0.0 | protein PHOSPHATE STARVATION RESPONSE 1-like isoform X3 | ||||
Swissprot | B8ANX9 | 1e-46 | PHR1_ORYSI; Protein PHOSPHATE STARVATION RESPONSE 1 | ||||
Swissprot | Q9SJW0 | 1e-47 | PHL7_ARATH; Myb family transcription factor PHL7 | ||||
TrEMBL | A0A2H3XJD1 | 0.0 | A0A2H3XJD1_PHODC; protein PHOSPHATE STARVATION RESPONSE 1-like isoform X3 | ||||
TrEMBL | A0A2H3XJG5 | 0.0 | A0A2H3XJG5_PHODC; protein PHOSPHATE STARVATION RESPONSE 1-like isoform X1 | ||||
STRING | XP_008784667.1 | 0.0 | (Phoenix dactylifera) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP50785 | 2 | 2 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G01060.1 | 5e-50 | G2-like family protein |