PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PDK_30s1179501g001
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Coryphoideae; Phoeniceae; Phoenix
Family G2-like
Protein Properties Length: 257aa    MW: 29693.6 Da    PI: 7.5855
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PDK_30s1179501g001genomePDKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like103.21.6e-321972255
             G2-like  2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55
                        prlrWtp+LH++Fv+a+e+LGG++kAtPk +l+lm+v gLt++hvkSHLQ+YR+
  PDK_30s1179501g001 19 PRLRWTPDLHHCFVRAIERLGGQDKATPKLVLQLMDVRGLTISHVKSHLQMYRS 72
                        8****************************************************7 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.601.3E-311575IPR009057Homeodomain-like
PROSITE profilePS5129410.5691575IPR017930Myb domain
SuperFamilySSF466891.34E-151775IPR009057Homeodomain-like
TIGRFAMsTIGR015575.1E-241972IPR006447Myb domain, plants
PfamPF002491.8E-82071IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 257 aa     Download sequence    Send to blast
MGSCGRNGAV RQYIRSKVPR LRWTPDLHHC FVRAIERLGG QDKATPKLVL QLMDVRGLTI  60
SHVKSHLQMY RSMRNDIGKQ GLQQTQERRH SCEHTDGGAD ELNDDTLLSS LKPQKEFQPQ  120
FMFSPLPMKR NQMETHAISN GETLATQYSF DDYLQTVAAE RGIKENLRWH KDATETGFLA  180
GDQLSKHKAQ WQMEAEPETF EVFKLEDQLL MPNNNRKRKK SKENYEDRCR SYVPPSFCDD  240
HGVKNEEVDD CLLATIL
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6j4r_A2e-182074357Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_B2e-182074357Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_C2e-182074357Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_D2e-182074357Protein PHOSPHATE STARVATION RESPONSE 1
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1215219RKRKK
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008812783.10.0putative Myb family transcription factor At1g14600
TrEMBLA0A2H3ZF130.0A0A2H3ZF13_PHODC; putative Myb family transcription factor At1g14600
STRINGXP_008812783.10.0(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP29663583
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G14600.18e-33G2-like family protein