PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PDK_30s1129701g003

Organism

Phoenix dactylifera

Taxonomic ID

42345

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Coryphoideae; Phoeniceae; Phoenix

Family

CAMTA

Protein Properties

Length: 1052aa MW: 117886 Da PI: 7.8994

Description

CAMTA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PDK_30s1129701g003	genome	PDK	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	CG-1	69.3	5.8e-22	9	53	33	77
CG-1 33 rpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvgg 77 + gsl+L++rk +ryfrkDG++w+kk+dgktvrE+hekLK++ PDK_30s1129701g003 9 KYAGGSLFLFDRKALRYFRKDGHNWRKKRDGKTVREAHEKLKIQL 53 5678***************************************85 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM01076	2.1E-6	1	76	IPR005559	CG-1 DNA-binding domain
PROSITE profile	PS51437	27.933	1	115	IPR005559	CG-1 DNA-binding domain
Pfam	PF03859	4.7E-16	11	52	IPR005559	CG-1 DNA-binding domain
Gene3D	G3DSA:2.60.40.10	3.3E-5	499	586	IPR013783	Immunoglobulin-like fold
CDD	cd00102	6.25E-5	499	586	No hit	No description
Pfam	PF01833	3.6E-4	500	584	IPR002909	IPT domain
SuperFamily	SSF81296	2.49E-16	500	585	IPR014756	Immunoglobulin E-set
SuperFamily	SSF48403	4.01E-12	686	762	IPR020683	Ankyrin repeat-containing domain
PROSITE profile	PS50297	16.308	688	764	IPR020683	Ankyrin repeat-containing domain
CDD	cd00204	1.94E-10	688	759	No hit	No description
Gene3D	G3DSA:1.25.40.20	2.0E-11	688	763	IPR020683	Ankyrin repeat-containing domain
PROSITE profile	PS50088	9.885	732	764	IPR002110	Ankyrin repeat
SMART	SM00248	0.0032	732	761	IPR002110	Ankyrin repeat
PROSITE profile	PS50096	7.071	810	839	IPR000048	IQ motif, EF-hand binding site
PROSITE profile	PS50096	8.425	865	894	IPR000048	IQ motif, EF-hand binding site
PROSITE profile	PS50096	6.668	1021	1049	IPR000048	IQ motif, EF-hand binding site

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0005634	Cellular Component	nucleus
GO:0003677	Molecular Function	DNA binding
GO:0005515	Molecular Function	protein binding

Sequence ? help Back to Top
Protein Sequence Length: 1052 aa Download sequence Send to blast
MMNLALAFKY AGGSLFLFDR KALRYFRKDG HNWRKKRDGK TVREAHEKLK IQLCLLAPYH 60 TDTWVYGITI QHYTISIRGS KATLFGSHAY FVKWHAKVCC AGIRHRTSCS VGSRPAVPHL 120 SNIDSTRVHS MQGTQANSAL YSSHLNSSTF TSQASYASSS GAADWNGHSP SSEFEDADSG 180 EEFGGGPLTD SVSCSGLQMA GTDVAEENTV GCSGSSHLYP RGFVNTADSS IDPLYANQAS 240 LQNFLISKDQ QKIHGALQGA GSFSGAHFNR HGNSVGWPDF RSISRKNGDM QEQNISFEHP 300 NCPDNMQRRM ADSVSKDHRM VNHAPDHGYN IISNAHPQIF TGVGKRNDQM KEEDAENVNS 360 FDHKRFVNEL THMYQMPHDH RSHIASQFKN NSGSLMNISV PDQPLEYEAE VSNASEKPLE 420 SDAHNNEHGD LKKLDSFGRW MNKEIGKDCD DSLMASDSCN YWNALDSQND DKEVSSLSRH 480 MRLDVDSLGP SLSQEQLFSI VDFSPDWTYS GVETKVLISG TFLGSLEPRS IKWCCMFGEL 540 EVSAEVLTTN VLRCQAPAHT PGRVPFYITR SDRLACSEIR EFEYRENLPR VSLVLKSEPE 600 DEIYLQLRFA KLLSLGLDRE KLFCSVEDCP KCSLKQKLFS ILNEENEWKK IERDSKAFQG 660 FHKNPRDALI QKLLKGKLYE WLICKAHEEG KGPNILDEEG QGAIHLAAAL GYDWAITPIV 720 TAGVSPSFRD ARGRTGLHWA AYYGREETVV ALIRLGAAPA LKEGVMESVS ATLAAQKAIE 780 TVQDQNLDSL AGDQGEQLSL RGSLAAVRNS AQAAARIQAA FRVHSFRQRQ LTESKDEEAE 840 ILDDMMVLSS LNNKFHRISH FNEALHTAAT KIQQKYRGWK GRKEFLKIRD RIVKIQTSSI 900 GSGSMICMSA MQLYWLHCQL SFKFNLTVVS GTHRSIVFQV TGNVFIIKIF KSDSFHQIDL 960 LIHYLEECGC MMVILRWRRK GAGLRGFRAE NASAAAEQVV GKTDEYDFLR LGRKQKVAGV 1020 EKALARVQSM ARQPEARDQY MRLVARSHKS KS

Sequence ? help Back to Top

Protein Sequence Length: 1052 aa Download sequence Send to blast

MMNLALAFKY AGGSLFLFDR KALRYFRKDG HNWRKKRDGK TVREAHEKLK IQLCLLAPYH  60
TDTWVYGITI QHYTISIRGS KATLFGSHAY FVKWHAKVCC AGIRHRTSCS VGSRPAVPHL  120
SNIDSTRVHS MQGTQANSAL YSSHLNSSTF TSQASYASSS GAADWNGHSP SSEFEDADSG  180
EEFGGGPLTD SVSCSGLQMA GTDVAEENTV GCSGSSHLYP RGFVNTADSS IDPLYANQAS  240
LQNFLISKDQ QKIHGALQGA GSFSGAHFNR HGNSVGWPDF RSISRKNGDM QEQNISFEHP  300
NCPDNMQRRM ADSVSKDHRM VNHAPDHGYN IISNAHPQIF TGVGKRNDQM KEEDAENVNS  360
FDHKRFVNEL THMYQMPHDH RSHIASQFKN NSGSLMNISV PDQPLEYEAE VSNASEKPLE  420
SDAHNNEHGD LKKLDSFGRW MNKEIGKDCD DSLMASDSCN YWNALDSQND DKEVSSLSRH  480
MRLDVDSLGP SLSQEQLFSI VDFSPDWTYS GVETKVLISG TFLGSLEPRS IKWCCMFGEL  540
EVSAEVLTTN VLRCQAPAHT PGRVPFYITR SDRLACSEIR EFEYRENLPR VSLVLKSEPE  600
DEIYLQLRFA KLLSLGLDRE KLFCSVEDCP KCSLKQKLFS ILNEENEWKK IERDSKAFQG  660
FHKNPRDALI QKLLKGKLYE WLICKAHEEG KGPNILDEEG QGAIHLAAAL GYDWAITPIV  720
TAGVSPSFRD ARGRTGLHWA AYYGREETVV ALIRLGAAPA LKEGVMESVS ATLAAQKAIE  780
TVQDQNLDSL AGDQGEQLSL RGSLAAVRNS AQAAARIQAA FRVHSFRQRQ LTESKDEEAE  840
ILDDMMVLSS LNNKFHRISH FNEALHTAAT KIQQKYRGWK GRKEFLKIRD RIVKIQTSSI  900
GSGSMICMSA MQLYWLHCQL SFKFNLTVVS GTHRSIVFQV TGNVFIIKIF KSDSFHQIDL  960
LIHYLEECGC MMVILRWRRK GAGLRGFRAE NASAAAEQVV GKTDEYDFLR LGRKQKVAGV  1020
EKALARVQSM ARQPEARDQY MRLVARSHKS KS

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_026658006.1	0.0	calmodulin-binding transcription activator 2-like
TrEMBL	A0A3Q0HTV4	0.0	A0A3Q0HTV4_PHODC; calmodulin-binding transcription activator 2-like
STRING	XP_008781202.1	0.0	(Phoenix dactylifera)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP608	38	140

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G64220.2	1e-114	Calmodulin-binding transcription activator protein with CG-1 and Ankyrin domains