PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PDK_30s1081791g004

Organism

Phoenix dactylifera

Taxonomic ID

42345

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Coryphoideae; Phoeniceae; Phoenix

Family

G2-like

Protein Properties

Length: 271aa MW: 29646.9 Da PI: 5.9189

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PDK_30s1081791g004	genome	PDK	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	50.8	3.6e-16	8	38	25	55
G2-like 25 ekAtPktilelmkvkgLtlehvkSHLQkYRl 55 +AtPk +l+lm+v gLt++hvkSHLQ+YR+ PDK_30s1081791g004 8 GEATPKLVLQLMNVRGLTISHVKSHLQMYRS 38 58****************************7 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
TIGRFAMs	TIGR01557	2.1E-11	5	38	IPR006447	Myb domain, plants
Gene3D	G3DSA:1.10.10.60	3.3E-15	5	42	IPR009057	Homeodomain-like
SuperFamily	SSF46689	8.96E-6	8	41	IPR009057	Homeodomain-like

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 271 aa Download sequence Send to blast
MGNCGRNGEA TPKLVLQLMN VRGLTISHVK SHLQMYRSMR NDMGRQASEL QARKHTCEAN 60 DGGADERDDD GSSPPSKPTT KEFQSQFGAR METQATSKSL QCSQGISEAV TFPYCFDDYM 120 QAMAVGRGIK EEGFRWQKDA AETGLLADHH PSKLKLLGYM VEESGPLKSS KPSDQNLISA 180 GKLKSEGSFE KGCRSYVSLL FEECSEEREE VDDCSLSLSL TLHPTHRSNT PSASESSGTI 240 SSSSRRNFSE CSGYSEGPRI NLDLSMSICG S

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_026664680.1	0.0	uncharacterized protein LOC103718164 isoform X2
TrEMBL	A0A3Q0IGJ6	0.0	A0A3Q0IGJ6_PHODC; uncharacterized protein LOC103718164 isoform X2
STRING	XP_008805079.1	0.0	(Phoenix dactylifera)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP2966	35	83

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G40260.1	5e-12	G2-like family protein