PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PDK_30s1045641g002 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Coryphoideae; Phoeniceae; Phoenix
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Family | NAC | ||||||||
Protein Properties | Length: 158aa MW: 18602.2 Da PI: 10.1527 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 117.8 | 1.1e-36 | 11 | 135 | 2 | 128 |
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkev 92 +pG +F+P +elv +yL++++ +++l+ ++ike+++y+++P+d+ + + k++yfF++r+kky++g+ + r tk gyWka+gkd+ + PDK_30s1045641g002 11 APGHHFRPFPKELVEFYLRPRLLNQPLPN-QAIKELNLYDFHPRDILGN-TPPGKHLYFFTPRKKKYPNGTMPARGTKGGYWKASGKDTII 99 69*************************99.88**************743.345789*********************************** PP NAM 93 lskkgelvglkktLvfykgrapkgektdWvmheyrl 128 +k +++g kk+Lvf++g++++g++t+W+m+ey++ PDK_30s1045641g002 100 RNKYANEIGRKKSLVFHEGHQRNGTRTRWLMQEYTI 135 ***99*****************************86 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 6.67E-38 | 9 | 136 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 37.853 | 10 | 156 | IPR003441 | NAC domain |
Pfam | PF02365 | 2.5E-19 | 12 | 135 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 158 aa Download sequence Send to blast |
MEEDEGIGNV APGHHFRPFP KELVEFYLRP RLLNQPLPNQ AIKELNLYDF HPRDILGNTP 60 PGKHLYFFTP RKKKYPNGTM PARGTKGGYW KASGKDTIIR NKYANEIGRK KSLVFHEGHQ 120 RNGTRTRWLM QEYTIKEFWF PTNQNKDEGP CHYVDKIF |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
3ulx_A | 3e-26 | 9 | 135 | 14 | 140 | Stress-induced transcription factor NAC1 |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_008807606.1 | 1e-106 | NAC transcription factor 32-like | ||||
TrEMBL | A0A2H3Z3D5 | 1e-105 | A0A2H3Z3D5_PHODC; NAC transcription factor 32-like | ||||
STRING | XP_008807606.1 | 1e-106 | (Phoenix dactylifera) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP13130 | 21 | 30 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G02450.1 | 1e-26 | NAC domain containing protein 35 |