PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PDK_30s1009081g002
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Coryphoideae; Phoeniceae; Phoenix
Family G2-like
Protein Properties Length: 210aa    MW: 23845.7 Da    PI: 7.8728
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PDK_30s1009081g002genomePDKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like24.37.2e-08106130125
             G2-like   1 kprlrWtpeLHerFveaveqLGGse 25 
                         kpr++W+ eL ++Fv av+qLG   
  PDK_30s1009081g002 106 KPRVVWSVELQRKFVAAVNQLGVDS 130
                         79*******************7554 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF521723.27E-8147IPR011006CheY-like superfamily
PROSITE profilePS5011016.066139IPR001789Signal transduction response regulator, receiver domain
Gene3DG3DSA:3.40.50.23003.9E-12146No hitNo description
Gene3DG3DSA:1.10.10.601.5E-8104131IPR009057Homeodomain-like
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0000160Biological Processphosphorelay signal transduction system
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 210 aa     Download sequence    Send to blast
MSANGDTKAV MKGITHGACD YLLKPIRIEE LKNIWQHVVR RKKFDSRYQN EGESSLKAQL  60
PNSEGVQGPR DRSGKLNRKR KDQTEEDELD SEENLHGNED PSTQKKPRVV WSVELQRKFV  120
AAVNQLGVDS LAQDCSIDKS RANGQLTYKD EDALEIIKSQ CDFNSTDCSH DGLVNAMIKP  180
YSNVKSKLLF TFEIGQECRY KNNFAKISFS
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator that binds specific DNA sequence. Functions as a response regulator involved in His-to-Asp phosphorelay signal transduction system. Phosphorylation of the Asp residue in the receiver domain activates the ability of the protein to promote the transcription of target genes. May directly activate some type-A response regulators in response to cytokinins. {ECO:0000250|UniProtKB:Q940D0}.
UniProtTranscriptional activator that binds specific DNA sequence. Functions as a response regulator involved in His-to-Asp phosphorelay signal transduction system. Phosphorylation of the Asp residue in the receiver domain activates the ability of the protein to promote the transcription of target genes. May directly activate some type-A response regulators in response to cytokinins. {ECO:0000250|UniProtKB:Q940D0}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008775535.19e-86two-component response regulator ORR24-like
SwissprotA2X1N21e-42ORR24_ORYSI; Two-component response regulator ORR24
SwissprotQ6H8051e-42ORR24_ORYSJ; Two-component response regulator ORR24
TrEMBLA0A2H3WYB92e-84A0A2H3WYB9_PHODC; Two-component response regulator
STRINGXP_008775535.13e-85(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP112222741
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G25180.11e-32response regulator 12
Publications ? help Back to Top
  1. Kikuchi S, et al.
    Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice.
    Science, 2003. 301(5631): p. 376-9
    [PMID:12869764]