PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PDK_30s1000401g006 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Coryphoideae; Phoeniceae; Phoenix
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Family | NAC | ||||||||
Protein Properties | Length: 193aa MW: 22107.3 Da PI: 8.7529 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 22.6 | 2.8e-07 | 88 | 158 | 54 | 128 |
NAM 54 eek.ewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelvglkktLvfy.kgrapkgektdWvmheyrl 128 +++ y++++ +++ +t+kr+ gyW+ g++ + + ++++v ++ + f +g+ p+ +Wvm ey+l PDK_30s1000401g006 88 KSSgVSYYYVECAENLKTEKRQVA-DGIGYWQRFGREIADGH-GSNAVMYRQAFKFIpRGDGPR----TWVMTEYTL 158 233245999999998887666655.578*******9665555.8899**********6666666....7******97 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 1.83E-5 | 90 | 163 | IPR003441 | NAC domain |
Pfam | PF02365 | 1.8E-4 | 93 | 158 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 193 aa Download sequence Send to blast |
MNDADKHESL FDLYVHTFVM LSFSEERADL SIPRIFYINL QGLLTMILIA LQEVLLTNTQ 60 GDSGRHHFPL NIPSLSSVGV AKATCDRKSS GVSYYYVECA ENLKTEKRQV ADGIGYWQRF 120 GREIADGHGS NAVMYRQAFK FIPRGDGPRT WVMTEYTLRP NKSGKNKRFL VLLLDSKHNY 180 VYLTRCISLS WVE |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_026665597.1 | 3e-55 | uncharacterized protein LOC113463605 | ||||
TrEMBL | A0A3Q0IK55 | 7e-54 | A0A3Q0IK55_PHODC; uncharacterized protein LOC113463605 |