PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pbr042848.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Pyrus
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Family | bZIP | ||||||||
Protein Properties | Length: 260aa MW: 27280.1 Da PI: 6.2374 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 23.2 | 1.5e-07 | 221 | 242 | 4 | 25 |
XCHHHCHHHHHHHHHHHHHHHH CS bZIP_1 4 lkrerrkqkNReAArrsRqRKk 25 ++++r++kNRe+A rsR+RK+ Pbr042848.1 221 QQKQKRMIKNRESAARSRERKQ 242 689******************9 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.20.5.170 | 1.2E-5 | 215 | 242 | No hit | No description |
SuperFamily | SSF57959 | 9.84E-5 | 223 | 243 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 225 | 240 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 260 aa Download sequence Send to blast |
MMATSSKMAV VSTANSDLPR RESSICSLST FLADDDDNRH HKHQSMSMDD ILRNIYSSTG 60 TGTGNEIHDN GHHQQLHHHA EARSVDEVWK EIVAGGVGVG VGEEEVGVAE GDGGDQVRGG 120 EGGDGGGGGM EEMTLEDYLT RAGAVREEDV SLNAGGVPIG YGQFQVQPPP PPPPPPPAAQ 180 GQLVYANGTT STSGGGGGGG GGGRAGKRRA VQEAPLDKAT QQKQKRMIKN RESAARSRER 240 KQVGFGLCST MFVWFLRKC* |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Pbr042848.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_009341305.1 | 1e-176 | PREDICTED: G-box-binding factor 4-like | ||||
TrEMBL | A0A498JA88 | 1e-113 | A0A498JA88_MALDO; Uncharacterized protein | ||||
STRING | XP_009341305.1 | 1e-175 | (Pyrus x bretschneideri) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF2028 | 34 | 81 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G44080.1 | 2e-10 | bZIP family protein |