PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pbr040761.1
Organism
Pyrus bretschneideri
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Pyrus
Family bHLH
Protein Properties Length: 514aa    MW: 56976.2 Da    PI: 5.9652
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pbr040761.1genomeCPETRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH47.14.3e-15307353354
                  HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
          HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                  ++h + Er+RR+++N +++ L++l+P++     +K++ a+iL  A++YI++L
  Pbr040761.1 307 TKHFATERQRRQQLNGKYDILKTLVPNP-----TKNDRASILGDAIDYINEL 353
                  78**************************.....9***************987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088815.567304353IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.1E-12307353IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474596.41E-16307373IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.105.8E-13307362IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000832.80E-13307357No hitNo description
SMARTSM003532.3E-12310359IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009555Biological Processpollen development
GO:0048658Biological Processanther wall tapetum development
GO:0052543Biological Processcallose deposition in cell wall
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 514 aa     Download sequence    Send to blast
MYQDTVGCNF DPNSIPDSAA ESLLDVNPIF PPPPPPPQQP QVLMPCSDTH HHNTTTTNSG  60
FGVEENIRLS IEELSYHHHR HENHHSSMDI ELQNELGFHV DNPYNNTTNH DNSINNSHLV  120
SFEHPTNWDN NIHGVHDQMQ QQFPDGTTTA TSTPYPQPPD LLNVFSLPRC SPSFLLQNPS  180
IAFTNPIQKT SNFPSSLGSL GDLPSAVDTP QGTASSVLYD PLFHLNLPPQ PPIFRELLQS  240
LPHGYTLPGS GNGSLFSSGG DEREGSGGGV LYDPDPDGSL GRQFDSGVLE FSREMASNGR  300
GRDLKGTKHF ATERQRRQQL NGKYDILKTL VPNPTKNDRA SILGDAIDYI NELLRTVDEL  360
KLLVEKKRCG RERIKRHKTE HDGSSAGDDE NCNVKPLGEH HDQSYSSGSL RSSWLQRKSK  420
DTQVDIRIID DEVTIKLVQR KKINLLLFVA RILDELQLDL HHVAGGHIGN SYSFLFNTKM  480
YEGSCLYASA IAGKLIEVLD RQYAAAVPPT SSY*
Cis-element ? help Back to Top
SourceLink
PlantRegMapPbr040761.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009361467.10.0PREDICTED: transcription factor bHLH91-like
TrEMBLA0A498JHD30.0A0A498JHD3_MALDO; Uncharacterized protein
STRINGXP_009361467.10.0(Pyrus x bretschneideri)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF37433262
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G31210.12e-86bHLH family protein