PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pbr039077.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Pyrus
Family Dof
Protein Properties Length: 431aa    MW: 46482.1 Da    PI: 7.3893
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pbr039077.1genomeCPETRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof124.82.8e-3967127262
       zf-Dof   2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 
                  ++k+l+cprC+s++tkfCyynny+++qPr+fCk+C+ryWt+GG +rnvPvG+grrknk+ss
  Pbr039077.1  67 PDKILPCPRCNSMDTKFCYYNNYNVNQPRHFCKNCQRYWTAGGIMRNVPVGAGRRKNKNSS 127
                  7899******************************************************976 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
ProDomPD0074788.0E-3152124IPR003851Zinc finger, Dof-type
PfamPF027016.7E-3269125IPR003851Zinc finger, Dof-type
PROSITE profilePS5088428.79871125IPR003851Zinc finger, Dof-type
PROSITE patternPS01361073109IPR003851Zinc finger, Dof-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 431 aa     Download sequence    Send to blast
MSGKELAADR QHDDDTSDQI TEDIKAPTAS SGISENPKTP SADRETSSKN GDQSETGSSQ  60
DKTLKKPDKI LPCPRCNSMD TKFCYYNNYN VNQPRHFCKN CQRYWTAGGI MRNVPVGAGR  120
RKNKNSSASQ YRHIFMSDAL QAAHASTANG AHNATLGGNG TVLTFGSDSP LCESMASVLN  180
LAERNQNCMQ NGFHGPEQRL LVSPTAGDNG DDRSSGSSIT ASNSTERGGR ASSQEPSAQN  240
CQTFPPQVPC FPGSPWPYPW NSAQWASAMP PPGFCHSGFP MSFYPAPPYW GCTVPGPWNV  300
PCLSPSSTLS HCATRSGPNS PTLGKHSRDE DIPNPSSSQN EEPAKENSSE RCVWIPKTLR  360
IDDPNEAARS SIWATLGIKN EKGNCTNEGG GLFKAFQSKA DEKNHVVEAS PVLQANPAAF  420
SRSLNFRERT *
Cis-element ? help Back to Top
SourceLink
PlantRegMapPbr039077.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_018503825.10.0PREDICTED: cyclic dof factor 2-like
TrEMBLA0A498IBV80.0A0A498IBV8_MALDO; Uncharacterized protein
STRINGXP_009360328.10.0(Pyrus x bretschneideri)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF62534147
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G39660.21e-104cycling DOF factor 2