PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pbr038419.1
Organism
Pyrus bretschneideri
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Pyrus
Family ERF
Protein Properties Length: 422aa    MW: 46394.1 Da    PI: 4.393
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pbr038419.1genomeCPETRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.95.9e-194796255
          AP2  2 gykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                 ++ GVr+++ +grWvAeI+d      ++ r++lg+f+taeeAa+a+++a+  l+g
  Pbr038419.1 47 RFVGVRQRP-SGRWVAEIKDtI----QKIRVWLGTFDTAEEAARAYDEAACLLRG 96
                 789******.7*********33....35**********************99998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000186.21E-3246103No hitNo description
PROSITE profilePS5103219.55947104IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.102.3E-2747103IPR001471AP2/ERF domain
SMARTSM003802.1E-3447111IPR001471AP2/ERF domain
SuperFamilySSF541714.12E-1947104IPR016177DNA-binding domain
PfamPF008471.1E-134796IPR001471AP2/ERF domain
PRINTSPR003676.3E-84859IPR001471AP2/ERF domain
PRINTSPR003676.3E-87086IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 422 aa     Download sequence    Send to blast
MARKRKVSEG VEDNSATSSE GTMGWDEMVK EASAVAELGG ARRARKRFVG VRQRPSGRWV  60
AEIKDTIQKI RVWLGTFDTA EEAARAYDEA ACLLRGANTR TNFWPCSHSP SSTPALPSKI  120
TNLLLQRLKA RNNANSCSPP SAPLPIINHQ HDNNLHEQAA KTELSETYTD FLNDPEDYYI  180
TSSNNHDIIT DHISASSIDY MTSSLESCLT NKETDHIEYG NLSELVQQTY SCGDANFAAE  240
GSEEDVDPEQ EQEEEMNGDQ VGVIDFQFVD DIGASNSNCY SPSPFEIAEE IEEPVLEAES  300
YTDEPSMLRA AMKRMKYERK FSASLYAFNG IPECLKLRIG SVNGNGKGRG VSECLSNLQR  360
ACGNKKEEEV VVTVGAAGEH QRNDSKQEEQ GSSMDVSLSG DGELSLWSSL DLPPICFLST  420
N*
Cis-element ? help Back to Top
SourceLink
PlantRegMapPbr038419.1
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009360645.10.0PREDICTED: dehydration-responsive element-binding protein 2E-like
TrEMBLA0A498HCV00.0A0A498HCV0_MALDO; Uncharacterized protein
STRINGXP_009360645.10.0(Pyrus x bretschneideri)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF33383267
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G19790.11e-23related to AP2 11