PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pbr038274.1
Organism
Pyrus bretschneideri
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Pyrus
Family bHLH
Protein Properties Length: 742aa    MW: 82347.8 Da    PI: 5.4135
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pbr038274.1genomeCPETRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH17.29.4e-063053411455
                  HHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
          HLH  14 driNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                  +++N++f  Lr+++P+       K++ ++ L  Av YI++L+
  Pbr038274.1 305 EKLNHRFCVLRSVVPNV-----SKMDRSSLLADAVAYINQLK 341
                  589*************6.....5*****************95 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF142158.6E-3520198IPR025610Transcription factor MYC/MYB N-terminal
PROSITE profilePS5088810.467291340IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000835.07E-7294345No hitNo description
SMARTSM003535.9E-6302346IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474593.79E-10303359IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.103.2E-10305358IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5001130.803411701IPR000719Protein kinase domain
SMARTSM002208.9E-20415697IPR000719Protein kinase domain
Gene3DG3DSA:3.30.200.201.8E-13454501No hitNo description
PfamPF000692.0E-40460690IPR000719Protein kinase domain
SuperFamilySSF561127.28E-66460728IPR011009Protein kinase-like domain
Gene3DG3DSA:1.10.510.104.5E-41502694No hitNo description
PROSITE patternPS001080543555IPR008271Serine/threonine-protein kinase, active site
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006468Biological Processprotein phosphorylation
GO:0004672Molecular Functionprotein kinase activity
GO:0005524Molecular FunctionATP binding
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 742 aa     Download sequence    Send to blast
MEEIISSSCP PDFCQETTFQ QLLQFIVQNV PEWWVYSIFW RASKDSSSDQ VSLSWAGGHF  60
QNTCDHLASK ISNQVNREFE ALLHDDVMDL DMGLVDHGDV TDSVLFYFYT VSLTQSFSAS  120
HGNNSDNILG RAFGSGGFVW LAGDHEFQFY ECERVKEARM HGIETLVCIA TPCGVVELAS  180
LDVIKEDYGL VHLSKSLFGS DGNNNNNRRL SKQQTSREGN ILDPILENEL FSADQNELTR  240
QDAGGINEAA PFNVGGSSPE SPSNSVGNFT SENTKNKTRS KNRGRSSNNG AASRQSQLSN  300
HVEAEKLNHR FCVLRSVVPN VSKMDRSSLL ADAVAYINQL KSKVEELEAK VQEQHKSLKR  360
AIIQVTILII NPAKAPALAA AASVVEVDVY VKVMGSEAKI RVQSPDQDYP YATLMNALKG  420
LGLQVYHASI SSVKELMIQD VVARLPYGFT REEISSGSKQ GLKEYASEVR IISRLRHQNL  480
VQLIGWCHEE SKLLLVYEFM SNGSLDSHLF KETSLLSWPA RYKIVQGLAS GLFYLHEQWE  540
QCVLHRDIKS SNVMLDSNFN VKLGDFGLAR LVDHGKQSQT TVVAGTRGYM ALEYITTGRA  600
SKESDVYSFG VVALEIACGR KAIDLSLESS QIEIVEWVWE LYGEGKFIQA GDPKLNGHFD  660
EEQMERLMIV GLWCAHPDFQ FRPSIQQAIQ VLNSEVALPN LPSKMPVATY FAPATSLSTF  720
STDTISSERG QTNSQDIVKA L*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6cth_A1e-11745271046305Concanavalin A-like lectin protein kinase family protein
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapPbr038274.1
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008386326.20.0transcription factor bHLH14-like isoform X2
TrEMBLA0A498IMI90.0A0A498IMI9_MALDO; Uncharacterized protein
STRINGXP_008386326.10.0(Malus domestica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF84134116
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G17880.15e-42bHLH family protein