PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pbr038239.1

Organism

Pyrus bretschneideri

Taxonomic ID

225117

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Pyrus

Family

NZZ/SPL

Protein Properties

Length: 460aa MW: 49958.5 Da PI: 7.5498

Description

NZZ/SPL family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pbr038239.1	genome	CPETR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NOZZLE	23	1.4e-07	28	74	49	95
NOZZLE 49 sktaqqkqkkptlrgmgvaklerfiieeekkklvvatvgdtssvaai 95 s + + kqkk rg+gva+le+ ++ee++kk ++a++ t+ ++ Pbr038239.1 28 SSSKKTKQKKVPQRGLGVAQLEKIRLEEQQKKAAAAAILSTTPPSSL 74 3445678999999********************88887776533332 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF08744	3.9E-5	29	75	IPR014855	Plant transcription factor NOZZLE

Sequence ? help Back to Top
Protein Sequence Length: 460 aa Download sequence Send to blast
MAHEEEQTQN TSNGIIGLGS NNIISSRSSS KKTKQKKVPQ RGLGVAQLEK IRLEEQQKKA 60 AAAAILSTTP PSSLSSPTKS TSSSCPSSVP IRHFYQPPSS IPFPSLDLPS PNSIFQPPLI 120 PPAHSGVDGR KLMISSGTVP FGMRNSYNNN NINGCGNGNH VPHLWNPCEF NVLDHKESSN 180 PGLDPGLAFR SNLNVPFESN NNNPIWAISN FSTRTHQFHQ QHPPPPLPPP PSPPPPSMVN 240 VSTATSTSSV LNFQIEPPSN QSYYSNYAPM WPDEEKMVGM KRPYPFSLEN PSVSFINFKF 300 PTFVAPPVRT DEGTSCGNSS PFNFDPAINP NFREGPSCSN SISESNSRSS IKENGSVNGD 360 FLTLGPPSTS WTCPSPKLKL PPSYLAFHNR EVPDFESFPY QGNNADDTYY QPGPSIPNPQ 420 QAFYSFFPPA KSQSGRAATT LNNNCNGEVG ESVDLNLRL*

Sequence ? help Back to Top

Protein Sequence Length: 460 aa Download sequence Send to blast

MAHEEEQTQN TSNGIIGLGS NNIISSRSSS KKTKQKKVPQ RGLGVAQLEK IRLEEQQKKA  60
AAAAILSTTP PSSLSSPTKS TSSSCPSSVP IRHFYQPPSS IPFPSLDLPS PNSIFQPPLI  120
PPAHSGVDGR KLMISSGTVP FGMRNSYNNN NINGCGNGNH VPHLWNPCEF NVLDHKESSN  180
PGLDPGLAFR SNLNVPFESN NNNPIWAISN FSTRTHQFHQ QHPPPPLPPP PSPPPPSMVN  240
VSTATSTSSV LNFQIEPPSN QSYYSNYAPM WPDEEKMVGM KRPYPFSLEN PSVSFINFKF  300
PTFVAPPVRT DEGTSCGNSS PFNFDPAINP NFREGPSCSN SISESNSRSS IKENGSVNGD  360
FLTLGPPSTS WTCPSPKLKL PPSYLAFHNR EVPDFESFPY QGNNADDTYY QPGPSIPNPQ  420
QAFYSFFPPA KSQSGRAATT LNNNCNGEVG ESVDLNLRL*

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Pbr038239.1

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_008367791.2	0.0	verprolin-like
TrEMBL	A0A498IMI4	0.0	A0A498IMI4_MALDO; Uncharacterized protein
STRING	XP_009341212.1	0.0	(Pyrus x bretschneideri)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF8956	12	13