PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pbr038026.1
Organism
Pyrus bretschneideri
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Pyrus
Family bHLH
Protein Properties Length: 235aa    MW: 25798.7 Da    PI: 9.7887
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pbr038026.1genomeCPETRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH42.51.1e-135096354
                 HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
          HLH  3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
                 ++h+e+ErrRR+riN  +++Lr+llP+      ++ +Ka+ L ++v+++++L
  Pbr038026.1 50 TSHKEAERRRRQRINAHLSTLRTLLPNT-----TRTDKASLLAEVVQHVREL 96
                 79*************************9.....8***************998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088816.1454796IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000833.55E-125099No hitNo description
SuperFamilySSF474599.42E-1550107IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000103.7E-115096IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.102.5E-1451104IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.4E-1253102IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:3.30.70.2604.9E-4136200No hitNo description
CDDcd048730.00746138201No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 235 aa     Download sequence    Send to blast
MLPFQNYSES ERQSWSSQNR NNNNLMDAAD SILSSAASAT ETAKSAEAST SHKEAERRRR  60
QRINAHLSTL RTLLPNTTRT DKASLLAEVV QHVRELRRQA DDLAGQGQAG SETWPFPGES  120
DEVTLNYCNG GTKLLKATLS CEDRPGLNRD LVQAIRSVRA RAVRAEMMTV GSRTKNVVVM  180
QWAGGGGEEG FRALKRALKA VVENRTSGSR LGKLASGNNR VRVYEDADED MSLY*
Cis-element ? help Back to Top
SourceLink
PlantRegMapPbr038026.1
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009344703.11e-172PREDICTED: transcription factor bHLH30-like
TrEMBLA0A498HWF41e-160A0A498HWF4_MALDO; Uncharacterized protein
STRINGXP_009344703.11e-171(Pyrus x bretschneideri)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF114412834
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56770.11e-18bHLH family protein