PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pbr037962.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Pyrus
Family B3
Protein Properties Length: 437aa    MW: 49022.5 Da    PI: 6.6624
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pbr037962.1genomeCPETRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B350.44e-16108197299
                  EEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
           B3   2 fkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 
                  +kv++ps v+   +l l  kf +eh+ k  ++ +++lede+gr++e k+ ++k++    l++GW++F  a+++  gD v+F+l+   +f+++v ++r+
  Pbr037962.1 108 LKVMMPSQVSGGFCLNLATKFRREHMPK--QDSMIVLEDENGREFETKYLVEKGG----LSGGWRGFSIAHKIMKGDAVIFHLVT--RFKFKVYIIRS 197
                  69***********************744..6669***************666666....9**********************976..67779999986 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.40.330.102.1E-1899198IPR015300DNA-binding pseudobarrel domain
SuperFamilySSF1019363.14E-20100198IPR015300DNA-binding pseudobarrel domain
CDDcd100175.92E-22105196No hitNo description
SMARTSM010193.5E-13107198IPR003340B3 DNA binding domain
PROSITE profilePS5086311.42107198IPR003340B3 DNA binding domain
PfamPF023621.4E-13108197IPR003340B3 DNA binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 437 aa     Download sequence    Send to blast
MVEAMAILQD QKQSSTNPLL LLPPPPPPHK GMATEKPFGQ KPPCLQLKTT SNVLNAKTNP  60
IMLECRKRKT PVRVTVESLY ESSQAQSSVM ERAKKIEASL NPRFPSLLKV MMPSQVSGGF  120
CLNLATKFRR EHMPKQDSMI VLEDENGREF ETKYLVEKGG LSGGWRGFSI AHKIMKGDAV  180
IFHLVTRFKF KVYIIRSNEV DCNFPLMRVD PPIKQVDTGG VTARGKEREI LEPIPQENAI  240
VCYTDSGPIS DQSENDCVDV GSEFLDGLRL SESVVTFKEV NCLENFNVQV NGLIINSEFS  300
KYIMTKYYEL CCSQNSFLHG QLLEGLNCKL IAGVISETVN IADAIRACKI TTPEDYLSTW  360
DKTLKAFDDL GMNVRFLRAR LDQLASLASK SRRPKEANVL EIKEAMDSRL DSEIETPNRS  420
SEEQEIMFQE LAKAPW*
Cis-element ? help Back to Top
SourceLink
PlantRegMapPbr037962.1
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009344646.10.0PREDICTED: B3 domain-containing protein Os01g0234100-like
RefseqXP_009344647.10.0PREDICTED: B3 domain-containing protein Os01g0234100-like
TrEMBLA0A498J2M10.0A0A498J2M1_MALDO; Uncharacterized protein
STRINGXP_009344646.10.0(Pyrus x bretschneideri)
STRINGXP_009344647.10.0(Pyrus x bretschneideri)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF10073398
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G19184.12e-36B3 family protein