PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pbr037867.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Pyrus
Family B3
Protein Properties Length: 366aa    MW: 41517.3 Da    PI: 5.6643
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pbr037867.1genomeCPETRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B336.77.3e-1277164183
                  EEEE-..-HHHHTT-EE--HHH.HTT....---..--SEEEEEE.TTS-EEEEEE..EEETTE.EEE-TTHHHHHHHHT--TT-EEEEE CS
           B3   1 ffkvltpsdvlksgrlvlpkkfaeeh....ggkkeesktltled.esgrsWevkliyrkksgr.yvltkGWkeFvkangLkegDfvvFk 83 
                  f k+l +sdv + gr+v+pk+ ae h    ++ ke +  l l d    ++W+v+++++ + ++ +++ + +++  +a+gL +gD+v++ 
  Pbr037867.1  77 FHKKLQNSDVRAIGRIVIPKREAECHfpvlES-KEAGLWLHLDDmDYMQVWTVRFRFWPNERSrMYIFDHTRSLIQAHGLSAGDTVMLF 164
                  89*********************999**9654.456679999996666*******996665555666669***************9864 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.40.330.101.1E-2069173IPR015300DNA-binding pseudobarrel domain
CDDcd100171.05E-1475167No hitNo description
SuperFamilySSF1019363.92E-1675168IPR015300DNA-binding pseudobarrel domain
PROSITE profilePS508638.69877180IPR003340B3 DNA binding domain
SMARTSM010192.2E-777180IPR003340B3 DNA binding domain
PfamPF023622.1E-877164IPR003340B3 DNA binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 366 aa     Download sequence    Send to blast
MAGVYEKNNV AAAASEDNLA GSSRSGEPIR SRNSYQRNPR DEPLVHEPVA RQPPVLLDPP  60
PTPHPRLFNP QQMRFLFHKK LQNSDVRAIG RIVIPKREAE CHFPVLESKE AGLWLHLDDM  120
DYMQVWTVRF RFWPNERSRM YIFDHTRSLI QAHGLSAGDT VMLFKDDQLG SYLLRAMRDA  180
VRPLSHPTTH NPIRLPSRLP YDPLQDFEVE SSVVPRVLKY NHQTIENIAV NVGVMNESRS  240
SNNLGVQITE QDHQTTVRSN NNVDVAVALV EEHHQTSVHE SNNVAMEDYQ TINANNNVIT  300
NVEAANEMIF PNLEDHNSST LTSLSSLFGS DNHGSSYDFG YPIDESWKVG MDDMDFDFSN  360
FSLPK*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6j9b_A1e-29731781105B3 domain-containing transcription factor FUS3
6j9b_D1e-29731781105B3 domain-containing transcription factor FUS3
Cis-element ? help Back to Top
SourceLink
PlantRegMapPbr037867.1
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008369649.11e-77uncharacterized protein LOC103433185
TrEMBLA0A498HQG30.0A0A498HQG3_MALDO; Uncharacterized protein
STRINGXP_008369649.15e-77(Malus domestica)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G26790.11e-31B3 family protein