PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pbr037283.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Pyrus
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Family | NAC | ||||||||
Protein Properties | Length: 78aa MW: 8897.32 Da PI: 10.1028 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 33.7 | 1.1e-10 | 9 | 54 | 2 | 46 |
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiy.kvePwd 46 + GfrFhPtd+elv+ yL+ ++ + k + +i+e++++ ++ Pw Pbr037283.1 9 TLGFRFHPTDQELVSSYLRDRALSGKPLGKPFIQEFNLFgQTPPWV 54 67*****************9988777555577****9872456665 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 6.93E-11 | 4 | 53 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 13.439 | 8 | 77 | IPR003441 | NAC domain |
Pfam | PF02365 | 9.6E-7 | 11 | 49 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 78 aa Download sequence Send to blast |
MEVGYYGMTL GFRFHPTDQE LVSSYLRDRA LSGKPLGKPF IQEFNLFGQT PPWVVWEQFG 60 GKFPTRSRLV LLLRAAF* |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Pbr037283.1 |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_028954569.1 | 1e-36 | NAC domain-containing protein 41-like | ||||
TrEMBL | A0A498K543 | 6e-33 | A0A498K543_MALDO; Uncharacterized protein | ||||
STRING | XP_009344383.1 | 2e-35 | (Pyrus x bretschneideri) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF12591 | 6 | 34 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G10480.3 | 2e-08 | NAC domain containing protein 50 |