PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pbr035554.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Pyrus
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Family | bZIP | ||||||||
Protein Properties | Length: 123aa MW: 14025.2 Da PI: 9.881 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 32.8 | 1.5e-10 | 34 | 88 | 2 | 56 |
XXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 2 kelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkev 56 ++ k ++r + NR +A +s qRKk +++ Le +++L+ e aL+ +le +k+ Pbr035554.1 34 RDPKLAKRIMTNRRSAMKSKQRKKVYVQTLECNIQKLQFEAAALIAQLELWKEDT 88 67799***********************************************976 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 1.2E-6 | 33 | 97 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 1.5E-7 | 35 | 87 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 1.85E-9 | 37 | 87 | No hit | No description |
CDD | cd14703 | 1.03E-12 | 39 | 87 | No hit | No description |
Gene3D | G3DSA:1.20.5.170 | 4.7E-9 | 39 | 87 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 123 aa Download sequence Send to blast |
MYGSSSTFSK DDHVISISST KKRTAAVIEE VAQRDPKLAK RIMTNRRSAM KSKQRKKVYV 60 QTLECNIQKL QFEAAALIAQ LELWKEDTRC ITADNNRLKG CLHNILEDIQ LQDSKDFSLV 120 FF* |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Pbr035554.1 |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_009358997.1 | 3e-86 | PREDICTED: probable transcription factor PosF21 | ||||
TrEMBL | A0A498JR49 | 2e-76 | A0A498JR49_MALDO; Uncharacterized protein | ||||
STRING | XP_009358997.1 | 1e-85 | (Pyrus x bretschneideri) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF22886 | 4 | 4 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G06070.1 | 4e-19 | bZIP family protein |