PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pbr035111.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Pyrus
Family Dof
Protein Properties Length: 315aa    MW: 34384.9 Da    PI: 9.5634
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pbr035111.1genomeCPETRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof123.19.5e-3940101263
       zf-Dof   2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkksss 63 
                  ke+al+cprC+stntkfCyynnysl+qPryfCk+CrryWt+GG+lr +PvGgg+rknk+sss
  Pbr035111.1  40 KEQALNCPRCNSTNTKFCYYNNYSLTQPRYFCKSCRRYWTEGGSLRSIPVGGGSRKNKRSSS 101
                  7899******************************************************9875 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
ProDomPD0074784.0E-282692IPR003851Zinc finger, Dof-type
PfamPF027013.5E-334298IPR003851Zinc finger, Dof-type
PROSITE profilePS5088428.914498IPR003851Zinc finger, Dof-type
PROSITE patternPS0136104682IPR003851Zinc finger, Dof-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 315 aa     Download sequence    Send to blast
MDTAQWPQGI VVKPIEEIVT NSCPKPAAAN NLERKARPQK EQALNCPRCN STNTKFCYYN  60
NYSLTQPRYF CKSCRRYWTE GGSLRSIPVG GGSRKNKRSS SSNNSPSTTS NNSSSSSASK  120
RLPDLIHQNP KINQAQDLNL TFPSTNQDFR NIISGHLLNH HHQQLPNNNI NDQSTNKQQN  180
HISTSSPTST TTTTTTSHLS ALELLTGLTS RGLNSFMPMP VLSDPNNNNS VYNSPSGLIN  240
PMQDFKPTLN FSLDGLGSGY GSLQGHHVQQ SSGRLLFPFE DLKQAPSGGG INEQNKQHGD  300
STGYWTGMLG GGSW*
Cis-element ? help Back to Top
SourceLink
PlantRegMapPbr035111.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009358664.10.0PREDICTED: dof zinc finger protein DOF4.6-like
TrEMBLA0A498JLQ70.0A0A498JLQ7_MALDO; Uncharacterized protein
STRINGXP_009358664.10.0(Pyrus x bretschneideri)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF67434137
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G24060.16e-49Dof family protein