PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pbr034805.1
Organism
Pyrus bretschneideri
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Pyrus
Family bZIP
Protein Properties Length: 282aa    MW: 30551.6 Da    PI: 10.2536
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pbr034805.1genomeCPETRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_151.32.5e-16212260452
                  XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
       bZIP_1   4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleel 52 
                  ++r +r++kNR +A rsR+RK+a++ eLe kv+ L +eN +Lk +le+l
  Pbr034805.1 212 DRRHKRMIKNRDSAARSRARKQAYTNELELKVAHLMEENARLKGQLEQL 260
                  6899***************************************777766 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1702.9E-15207260No hitNo description
SMARTSM003384.9E-14209270IPR004827Basic-leucine zipper domain
PROSITE profilePS5021711.243211260IPR004827Basic-leucine zipper domain
PfamPF001708.3E-14213260IPR004827Basic-leucine zipper domain
CDDcd147078.63E-26213267No hitNo description
SuperFamilySSF579591.75E-11213261No hitNo description
PROSITE patternPS000360216231IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009911Biological Processpositive regulation of flower development
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:2000028Biological Processregulation of photoperiodism, flowering
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0043621Molecular Functionprotein self-association
Sequence ? help Back to Top
Protein Sequence    Length: 282 aa     Download sequence    Send to blast
MLSSTGSDQT NHNTTSTSSW SSSSSPSPFS QPSSFQTPQR TMEEVWKDFN LASLTDPTTQ  60
IRSSSSSSTS PLLQINLPNG PHQGRHHHPN FRNMTLQDFL ARPFAHDSPA AAAALVSAAA  120
SPPSPLPPAA PTLLSLNNPG SEFQLFYASD SLRPPSSGFI DQHQANHNNI SSSVSNSFSG  180
CPFESLATSS FGLPSFGKRS FTESDHSNSG GDRRHKRMIK NRDSAARSRA RKQAYTNELE  240
LKVAHLMEEN ARLKGQLEQL IAAASQQPKR HNLHRTSTAP F*
Cis-element ? help Back to Top
SourceLink
PlantRegMapPbr034805.1
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKU3194350.0KU319435.1 Eriobotrya deflexa FD2 mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_018504483.10.0PREDICTED: protein FD-like
TrEMBLA0A109R4F21e-152A0A109R4F2_9ROSA; FD2
STRINGXP_009363456.10.0(Pyrus x bretschneideri)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF37553252
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G35900.18e-33bZIP family protein