PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pbr034497.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Pyrus
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Family | GeBP | ||||||||
Protein Properties | Length: 194aa MW: 21348.9 Da PI: 4.546 | ||||||||
Description | GeBP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF573 | 62.5 | 1.1e-19 | 67 | 147 | 18 | 98 |
DUF573 18 Glidfkaktgkspsddidafyefvkksisfkvsksqlve....KirrLKkKfkkkvkkaksgkepsfskehdqkifelskkiWgs 98 G+i+fk+k+g+ + +++ f ef+kk ++++ s++qlve Kirr KkK++ ++ g++p+fsk+h+ k+++l kkiWgs Pbr034497.1 67 GIIEFKSKKGVAANSNMAPFLEFIKKDLQVDLSTDQLVEkltdKIRRVKKKYQAGED----GEDPVFSKPHELKCLDLWKKIWGS 147 9***********************************976222268999999987655....6*********************95 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF04504 | 4.0E-17 | 66 | 146 | IPR007592 | Protein of unknown function DUF573 |
Sequence ? help Back to Top |
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Protein Sequence Length: 194 aa Download sequence Send to blast |
MAPKKLVEDP PPAVVEYFDE ETVDEDEEEE DDAVEAEVSK AKSVDLNDDE LGGGRRGRKA 60 LCGCSEGIIE FKSKKGVAAN SNMAPFLEFI KKDLQVDLST DQLVEKLTDK IRRVKKKYQA 120 GEDGEDPVFS KPHELKCLDL WKKIWGSEGN GIDSNAKGGK RKPPRKNNKV NNDTVLALPI 180 SEVTEERGAE ECG* |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Pbr034497.1 |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_017179502.2 | 3e-72 | STOREKEEPER protein-like, partial | ||||
TrEMBL | A0A498HB53 | 2e-68 | A0A498HB53_MALDO; Uncharacterized protein | ||||
STRING | XP_008342106.1 | 8e-70 | (Malus domestica) | ||||
STRING | XP_008353581.1 | 1e-69 | (Malus domestica) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF13966 | 11 | 19 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G00390.1 | 6e-15 | DNA-binding storekeeper protein-related transcriptional regulator |