PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pbr033328.1
Organism
Pyrus bretschneideri
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Pyrus
Family GeBP
Protein Properties Length: 394aa    MW: 43302.2 Da    PI: 4.5444
Description GeBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pbr033328.1genomeCPETRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF57396.42.7e-30159255298
       DUF573   2 lfqrlwseeDeivlLqGlidfkaktgkspsddidafyefvkksisfkvsksqlve....KirrLKkKfkkkvkkaksgkepsfskehdqkifelskki 95 
                  + qr wse+Dei++L+G+i+f++k+g+ +s+++  f ef+k+ ++++ s +qlve    KirrLKkK++  ++    g++p+fsk+h+ k+fel+kki
  Pbr033328.1 159 KGQRFWSEDDEITILKGIIEFESKKGVAASSNVAPFLEFIKNDLQVDLSIDQLVEkltdKIRRLKKKYQAGED----GEDPVFSKPHELKCFELCKKI 252
                  569************************************************9875222279*******87655....5******************** PP

       DUF573  96 Wgs 98 
                  Wgs
  Pbr033328.1 253 WGS 255
                  *95 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF045041.9E-26161254IPR007592Protein of unknown function DUF573
Sequence ? help Back to Top
Protein Sequence    Length: 394 aa     Download sequence    Send to blast
MAPKKLAEDP PPAVVEDSDD ETIDEEEEEE DDAVEVSKAR SVDLNDDDLE EEEEEEEEEE  60
DKPSAGVTKS NPQSGSASED DSGSGSETES DNHSPSASDF TVKPIVSKPA NAVMPSKKTA  120
SAKPAAAPSS GSKRPAETEP KPKNSKKKKV GGDDEDAKKG QRFWSEDDEI TILKGIIEFE  180
SKKGVAASSN VAPFLEFIKN DLQVDLSIDQ LVEKLTDKIR RLKKKYQAGE DGEDPVFSKP  240
HELKCFELCK KIWGSEANGL DSNVKGGKRK PLRKNNKVNN DTVLALPVSD VSVKKEVQNN  300
VTNRGVKADQ DDFWSKYPCL SGSLRTGNCV PRSDLTRLLI EKMPSLVGSS KAKELEERWR  360
VLQLIEMDLS VKKLDLIQEQ TKLVLDSMKS LKD*
Cis-element ? help Back to Top
SourceLink
PlantRegMapPbr033328.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009341437.10.0PREDICTED: STOREKEEPER protein-like
TrEMBLA0A498J4090.0A0A498J409_MALDO; Uncharacterized protein
STRINGXP_009341437.10.0(Pyrus x bretschneideri)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF139661119
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G00390.11e-23DNA-binding storekeeper protein-related transcriptional regulator