PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pbr033327.1
Organism
Pyrus bretschneideri
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Pyrus
Family GeBP
Protein Properties Length: 398aa    MW: 43473.3 Da    PI: 4.4777
Description GeBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pbr033327.1genomeCPETRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF57394.79.6e-30163259298
       DUF573   2 lfqrlwseeDeivlLqGlidfkaktgkspsddidafyefvkksisfkvsksqlve....KirrLKkKfkkkvkkaksgkepsfskehdqkifelskki 95 
                  + qr wse+Dei++L+G+i+f++k+g+ +s+++  f ef+k+ ++++ s +qlve    KirrLKkK++  ++    g +p+fsk+h+ k+fel+kki
  Pbr033327.1 163 KGQRFWSEDDEITILKGIIEFESKKGVAASSNVAPFLEFIKNDLQVDLSIDQLVEkltdKIRRLKKKYQAGED----GVDPVFSKPHELKCFELCKKI 256
                  569************************************************9875222279*******87655....59******************* PP

       DUF573  96 Wgs 98 
                  Wgs
  Pbr033327.1 257 WGS 259
                  *95 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF045047.9E-26165258IPR007592Protein of unknown function DUF573
Sequence ? help Back to Top
Protein Sequence    Length: 398 aa     Download sequence    Send to blast
MAPKKLAEGP PPAVVEDSDD ETVDEEEEEE DDAVEVSKAK SVDLNDDDLE EEEEEEEEEE  60
EEEEKPSAAV TKSNPQSGSA SEDDSGSGSE TESDNHSPSA SDFTVKPIVS KPANNAVMPS  120
KKTALAKPAA APNSGSKRPA ETEANPKNSK KKKVGGDDED AKKGQRFWSE DDEITILKGI  180
IEFESKKGVA ASSNVAPFLE FIKNDLQVDL SIDQLVEKLT DKIRRLKKKY QAGEDGVDPV  240
FSKPHELKCF ELCKKIWGSE ANGLDSNVKG GKRKPPRKNN KVNNDTVLAL PVSDVSVKKE  300
VQDNATNRGV KADPDDFWSK HPCLSGSLRT GNCVPRSDLT GLLIEKVPSL VGSSKAKELE  360
ERWRALQLIE MDLSVKKLDL MQEQTKLVLD SMKSLKD*
Cis-element ? help Back to Top
SourceLink
PlantRegMapPbr033327.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_018499573.10.0PREDICTED: STOREKEEPER protein-like
TrEMBLA0A498J4090.0A0A498J409_MALDO; Uncharacterized protein
STRINGXP_009341438.10.0(Pyrus x bretschneideri)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF139661119
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G00390.12e-23DNA-binding storekeeper protein-related transcriptional regulator