PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pbr033203.1
Organism
Pyrus bretschneideri
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Pyrus
Family NAC
Protein Properties Length: 553aa    MW: 63155.1 Da    PI: 7.1514
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pbr033203.1genomeCPETRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM158.62.5e-49291542128
          NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgel 99 
                  +pGfrFhPt+eel+ +yL++kvegk++++ e i+ +d+y+++Pw+Lp++++ +ekew+f+++rd+ky++g+r+nr+t+sgyWkatg d+ + s++ + 
  Pbr033203.1  29 MPGFRFHPTEEELIEFYLRRKVEGKRFNV-ELITFLDLYRYDPWELPAMAAIGEKEWFFYVPRDRKYRNGDRPNRVTTSGYWKATGADRMIRSENFRS 125
                  79***************************.89***************888889********************************************* PP

          NAM 100 vglkktLvfykgrapkgektdWvmheyrl 128
                  +glkktLvfy+g+apkg +t+W+m+eyrl
  Pbr033203.1 126 IGLKKTLVFYSGKAPKGLRTSWIMNEYRL 154
                  ***************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019413.01E-5528174IPR003441NAC domain
PROSITE profilePS5100555.51628175IPR003441NAC domain
PfamPF023652.8E-2430154IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 553 aa     Download sequence    Send to blast
MSHDDSNKAD DHDHEHDEHV DEHEHDMVMP GFRFHPTEEE LIEFYLRRKV EGKRFNVELI  60
TFLDLYRYDP WELPAMAAIG EKEWFFYVPR DRKYRNGDRP NRVTTSGYWK ATGADRMIRS  120
ENFRSIGLKK TLVFYSGKAP KGLRTSWIMN EYRLPHHETE RYQKGEISLC RVYKRAGVED  180
HPSLPRCLPA SRASTSGSSV LVDQSMTMSD NKKQHTNNTN TIDTVMEKIQ AFNEGQSQQI  240
HHDHEHQMDQ KISIETEGSS GNSDVTTVLG LSKYKVYHHG HHQRHNIESS TSTAAALGQL  300
GTPTHPVDQE EGMPAFLHHL TNSRQVAANC YSGISSTGNS CAALFTGGSS SVSSSNMNAI  360
DDLHRLLNYQ PVHVQQQAAP NHYQQQQYVQ HHLVQYYDHH HHPPPQPSNF FSTNLPASAA  420
ALSTXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXPTTHFQ  480
LLSLTAYGTG IQYQSQTGRT TTIRSSNQSI IYIYIYIYIV KVLMTNVILT YRSIIVLSIN  540
FLISYAISYL LS*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3swm_A1e-553017522168NAC domain-containing protein 19
3swm_B1e-553017522168NAC domain-containing protein 19
3swm_C1e-553017522168NAC domain-containing protein 19
3swm_D1e-553017522168NAC domain-containing protein 19
3swp_A1e-553017522168NAC domain-containing protein 19
3swp_B1e-553017522168NAC domain-containing protein 19
3swp_C1e-553017522168NAC domain-containing protein 19
3swp_D1e-553017522168NAC domain-containing protein 19
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapPbr033203.1
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009341254.10.0PREDICTED: NAC domain-containing protein 35-like, partial
TrEMBLA0A498HRP50.0A0A498HRP5_MALDO; Uncharacterized protein
STRINGXP_009341254.10.0(Pyrus x bretschneideri)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF72033146
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G02450.11e-113NAC domain containing protein 35