PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pbr032736.1
Organism
Pyrus bretschneideri
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Pyrus
Family bHLH
Protein Properties Length: 425aa    MW: 47249.8 Da    PI: 6.3806
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pbr032736.1genomeCPETRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH29.11.8e-09357402655
                  HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
          HLH   6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                  +++Er+RR ri +++ +L+el P+     +k  + ae+L +A  +Ik+Lq
  Pbr032736.1 357 SIAERKRRTRISERMKKLQELFPNM----DKQTNTAEMLDLAAGFIKDLQ 402
                  689*********************7....688*****************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088813.649351401IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474596.94E-13353407IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000833.82E-10355406No hitNo description
Gene3DG3DSA:4.10.280.102.7E-11356406IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003536.9E-10357407IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.5E-6357402IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 425 aa     Download sequence    Send to blast
MSSLLYKYNP NFKASEGELR KNHAAEFMDS DIFHQQHPQQ QQSSGLTRYQ SAPSSFLMQQ  60
MDNNGGGTED LRYLQPSSPE VETVLPRFIS SCNEPDQRDN GVQQHQFEIQ ETPVNVKGEA  120
GDSVSEHING YSNSTHMMYQ APRGQQAHGL DSSSFAAVNS TEMENSMMQS KIGVGNRSNL  180
VRQSSSPAGF FPDLTVDDGF NVMKDSAGYR AGNGTNGEAS PSTSRFGNQL SFSSRPSSYS  240
GRMPRIAENE NGNLGEGLGN ANGSNSPYQS SFANDSWDDS SFNDLKIARD NDGNKFSTST  300
AFESQNNDFG HRNHGLTQHL RFSKHFETPA MEKYLQFEDS TPCKSRAKRG FATHPRSIAE  360
RKRRTRISER MKKLQELFPN MDKQTNTAEM LDLAAGFIKD LQKQVKAGFC CFNFIMDLKA  420
LSDE*
Cis-element ? help Back to Top
SourceLink
PlantRegMapPbr032736.1
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009365015.10.0PREDICTED: transcription factor bHLH130-like
RefseqXP_009365016.10.0PREDICTED: transcription factor bHLH130-like
TrEMBLA0A498KI660.0A0A498KI66_MALDO; Uncharacterized protein
STRINGXP_009365015.10.0(Pyrus x bretschneideri)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF40053359
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G42280.12e-48bHLH family protein