PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pbr032336.1
Organism
Pyrus bretschneideri
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Pyrus
Family bHLH
Protein Properties Length: 286aa    MW: 32127.4 Da    PI: 9.0678
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pbr032336.1genomeCPETRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH14.37.7e-051752141155
                  HHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
          HLH  11 rRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                  rR +++ +++  L++l+ +      +K + a++L++A  YI  Lq
  Pbr032336.1 175 RRSQKLSDKITALQKLVSPY-----GKTDTASVLQEASIYIMLLQ 214
                  7999**************99.....9***************9998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS508889.61164213IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000834.27E-4175218No hitNo description
SuperFamilySSF474599.03E-9175225IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.103.1E-6175222IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 286 aa     Download sequence    Send to blast
MRNADLLPSL PSHLFNFGNN IDIQMTNWDA QMNMNRKFGF CMGSKAFESD NQINMRAGDF  60
SLPLQQSSSL ITYQSAVNYP SGAFRYDDIA GQSMLLDKKI SAPQFQVDCQ AIQNARKRPI  120
EVDDLGRLVG DTTALNDLYN NKRNKMTNGN SQQQWHQENS MEQQNNKKLH HLPVRRSQKL  180
SDKITALQKL VSPYGKTDTA SVLQEASIYI MLLQEQIQQN LERMLSSSYK NAAALHPQES  240
GRGQVLDLRS KGLCLVPVSI TQKVTMEEGS DHLATSRKIV IANNF*
Cis-element ? help Back to Top
SourceLink
PlantRegMapPbr032336.1
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_018503272.10.0PREDICTED: uncharacterized protein LOC103948380 isoform X1
TrEMBLA0A498JM751e-163A0A498JM75_MALDO; Uncharacterized protein
STRINGXP_009357679.10.0(Pyrus x bretschneideri)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF133551522
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G31730.12e-21bHLH family protein