PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pbr030745.1
Organism
Pyrus bretschneideri
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Pyrus
Family ERF
Protein Properties Length: 285aa    MW: 30889.9 Da    PI: 6.4442
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pbr030745.1genomeCPETRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP251.42.7e-16109158155
          AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                  ++y+G+r ++  g+Wv+eIr+p++   +kr++lg+f t+e+Aa+a++ a+++l+g
  Pbr030745.1 109 PRYHGIR-CR-GGKWVSEIREPRK---TKRIWLGTFPTPEMAAAAYDVAALSLKG 158
                  689***9.55.7*********843...5************************987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000183.16E-14109166No hitNo description
PfamPF008471.2E-9109158IPR001471AP2/ERF domain
SMARTSM003801.6E-23110174IPR001471AP2/ERF domain
PROSITE profilePS5103219.164110166IPR001471AP2/ERF domain
SuperFamilySSF541714.45E-17110166IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.101.8E-24110166IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 285 aa     Download sequence    Send to blast
MADLNPNPNT SNNVNQTLDQ STPAYPPLVV SPIDFHPPPP TLLHPTHQTL LQALPPHAPH  60
QVLPHSLLTP HRHTHETTEI PSPSARAALH IQTLPKPTTM ASSSSGKHPR YHGIRCRGGK  120
WVSEIREPRK TKRIWLGTFP TPEMAAAAYD VAALSLKGTN IALNFPSFIG LYPVPPSTSA  180
IDIRTAAATA AAALRKNSDP MESPKMGQMQ KHEGDDMMMS STSLASSVGD FIDEEELFQM  240
PNLLVDMAEG MLVSPPRMND SPPSDYDDSP GNSDGGEGRL WSYY*
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapPbr030745.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009339653.10.0PREDICTED: ethylene-responsive transcription factor ERF027-like
SwissprotQ9FJ907e-44ERF25_ARATH; Ethylene-responsive transcription factor ERF025
TrEMBLA0A498JYS11e-116A0A498JYS1_MALDO; Uncharacterized protein
STRINGXP_009339653.10.0(Pyrus x bretschneideri)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF56232144
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52020.14e-38ERF family protein
Publications ? help Back to Top
  1. Li B, et al.
    Network-Guided Discovery of Extensive Epistasis between Transcription Factors Involved in Aliphatic Glucosinolate Biosynthesis.
    Plant Cell, 2018. 30(1): p. 178-195
    [PMID:29317470]