PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pbr030476.1
Organism
Pyrus bretschneideri
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Pyrus
Family bZIP
Protein Properties Length: 287aa    MW: 30975.7 Da    PI: 4.8544
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pbr030476.1genomeCPETRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_141.52.8e-13225270348
                  XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
       bZIP_1   3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkke 48 
                  + +r++r++kNRe+A rsR+RK+a++ eLe  +  Le+e ++L ke
  Pbr030476.1 225 AQQRQKRMIKNRESAARSRERKQAYQVELESLAVRLEEEKEQLLKE 270
                  679**************************************99876 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003381.7E-7223286IPR004827Basic-leucine zipper domain
PfamPF001702.9E-11225270IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.013225270IPR004827Basic-leucine zipper domain
CDDcd147079.49E-16227254No hitNo description
SuperFamilySSF579598.44E-9227270No hitNo description
Gene3DG3DSA:1.20.5.1701.0E-11228270No hitNo description
PROSITE patternPS000360230245IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 287 aa     Download sequence    Send to blast
MASSKLMSSS STSQNSDLSR RPSTFSSATK PKPTTTTPHP SSSSAHTQTL NNYQNSIVNT  60
TPSLPIGSMT ADGLLYDPTP MTDATLLDTQ ITLLDAAANV NGPSAPPPKT VDEVWREIVS  120
GDSRKECKAE VPDEMMTLED FLARAGAVEE NDIKDFPLAP PPEMERLSSG VFSFDQIPLS  180
PFGSIDKVEG SIVGFGNGVD PAGSGGRVGR GKRGRAVMEP MDKAAQQRQK RMIKNRESAA  240
RSRERKQAYQ VELESLAVRL EEEKEQLLKE QVTELCFGQL LATDSQ*
Cis-element ? help Back to Top
SourceLink
PlantRegMapPbr030476.1
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009339488.10.0PREDICTED: G-box-binding factor 4-like
TrEMBLA0A498K3121e-148A0A498K312_MALDO; Uncharacterized protein
STRINGXP_009339488.10.0(Pyrus x bretschneideri)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF20283481
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G44080.12e-44bZIP family protein