 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
Pbr029830.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Pyrus
|
| Family |
LFY |
| Protein Properties |
Length: 407aa MW: 45074.7 Da PI: 7.3097 |
| Description |
LFY family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Pbr029830.1 | genome | CPETR | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | FLO_LFY | 623.2 | 4.4e-190 | 1 | 391 | 1 | 386 |
FLO_LFY 1 mdpeafsaslfkwdpraaaaapparlleeaavseapleaaaaaaarklr........eleelfkayGvryltvakiaelGftvstLvdmkdeelddlm 90
mdp+afsa+lfkwd r ++ p++r++ eaav++a+ +aaa a ++lr +le+lf+ayGvry+t+akiaelGftv+tL+dm+d+eldd+m
Pbr029830.1 1 MDPDAFSANLFKWDLRGMV-VPTNRVQLEAAVPPAA-AAAAGAVGYTLRaprelglgGLEDLFQAYGVRYYTAAKIAELGFTVNTLLDMNDDELDDMM 96
9*************99776.6788999999887777.55566666676677788899***************************************** PP
FLO_LFY 91 kslseifrldllvGeryGikaavraerrrleeeeaekkrrkllsedeet.aldalsqeglseepvqeekeaagsggeglgeaelvaaeekkseeekkk 187
+sls+ifr++l+vGeryGikaavraerrrleee+ ++rr+ +s d++t aldalsqeglseepvq+e+e++gsg ++ ++e+v+a e++++++++k
Pbr029830.1 97 SSLSQIFRWELIVGERYGIKAAVRAERRRLEEED--SRRRNPVSGDTTTnALDALSQEGLSEEPVQQEEEMVGSGVGM--AWEVVTAGERRKKQRRMK 190
********************************88..77777898887766***********************98888..999999997555444444 PP
FLO_LFY 188 askkkqkrkkkkelkseededeeeeededeegsgedge...erqrehPfivtepgevargkknGLDYLfdLyeqCrefLlqvqkiakerGekcPtkvt 282
+ + ++ ++++++e ++++d +++g+g +g erqrehPfivtepgevargkknGLDYLf+LyeqCr+fL+qvq+iakerGekcPtkvt
Pbr029830.1 191 KGQYRNCSAGG-GHNNDHNEGVDDKDDMNGQGNGGGGGllgERQREHPFIVTEPGEVARGKKNGLDYLFHLYEQCRDFLIQVQNIAKERGEKCPTKVT 287
43322222222.22333444445555555555555554677********************************************************* PP
FLO_LFY 283 nqvfryakkagasyinkPkmrhYvhCYalhcLdeeasnalrrafkergenvGawrqacykplvaiaarqgwdidavfnahprLsiWYvPtkLrqLChl 380
nqvfryakk+gasyinkPkmrhYvhCYalhcLd easn lrrafkergenvGawrqacykplv iaa qgwdid +fn+hp LsiWYvPtkLrqLCh+
Pbr029830.1 288 NQVFRYAKKSGASYINKPKMRHYVHCYALHCLDVEASNVLRRAFKERGENVGAWRQACYKPLVVIAAGQGWDIDVIFNSHPPLSIWYVPTKLRQLCHA 385
************************************************************************************************** PP
FLO_LFY 381 erskas 386
+r++a+
Pbr029830.1 386 QRHNAT 391
**9986 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 407 aa
Download sequence Send
to blast |
MDPDAFSANL FKWDLRGMVV PTNRVQLEAA VPPAAAAAAG AVGYTLRAPR ELGLGGLEDL 60
FQAYGVRYYT AAKIAELGFT VNTLLDMNDD ELDDMMSSLS QIFRWELIVG ERYGIKAAVR 120
AERRRLEEED SRRRNPVSGD TTTNALDALS QEGLSEEPVQ QEEEMVGSGV GMAWEVVTAG 180
ERRKKQRRMK KGQYRNCSAG GGHNNDHNEG VDDKDDMNGQ GNGGGGGLLG ERQREHPFIV 240
TEPGEVARGK KNGLDYLFHL YEQCRDFLIQ VQNIAKERGE KCPTKVTNQV FRYAKKSGAS 300
YINKPKMRHY VHCYALHCLD VEASNVLRRA FKERGENVGA WRQACYKPLV VIAAGQGWDI 360
DVIFNSHPPL SIWYVPTKLR QLCHAQRHNA TASSSASGGG GEHLPY*
|
| Functional Description ? help
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| Source |
Description |
| UniProt | Probable transcription factor. {ECO:0000250}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | AB853871 | 0.0 | AB853871.1 Pyrus pyrifolia PpLFY1a mRNA for LEAFY protein, complete cds, cultivar: Kosui. |
| Best hit in Arabidopsis thaliana ? help
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| Hit ID |
E-value |
Description |
| AT5G61850.1 | 1e-134 | floral meristem identity control protein LEAFY (LFY) |
