PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pbr028659.1
Organism
Pyrus bretschneideri
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Pyrus
Family bZIP
Protein Properties Length: 453aa    MW: 50202.2 Da    PI: 9.2683
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pbr028659.1genomeCPETRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_131.73.4e-10167207545
                  CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
       bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaL 45 
                  k  rr+++NReAAr+sR+RKka++++Le    +L++  ++L
  Pbr028659.1 167 KTLRRLAQNREAARKSRLRKKAYVQQLESSRLKLTQLEQEL 207
                  788*************************9777777666555 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003382.7E-9163226IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.415165209IPR004827Basic-leucine zipper domain
SuperFamilySSF579596.88E-7167210No hitNo description
PfamPF001702.7E-7167207IPR004827Basic-leucine zipper domain
CDDcd147087.86E-21167219No hitNo description
Gene3DG3DSA:1.20.5.1701.5E-7168211No hitNo description
PROSITE patternPS000360170185IPR004827Basic-leucine zipper domain
PfamPF141441.8E-32249324IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 453 aa     Download sequence    Send to blast
MGSRRVKVDA NDGNKVVTDM PSFVPPVPTP NPTGTEGSSI RSSRISDFRT LEQTLGFRIE  60
DAVDIGRSPM FSQNKLNRQA VGSSDAQFGG LNKLMPLQKE PQPNLLSVSR SNHENWGESN  120
MADGSPRTDT STDDTEDKNQ KIEGNQMTAL LASDSSDRSK EKSGDQKTLR RLAQNREAAR  180
KSRLRKKAYV QQLESSRLKL TQLEQELQRA RQQGIFISSS GDQSHSMNGN GALAFDVEYA  240
RWLEEHNRQI NELRAAVNSH AGDTELRTVI DNVIAHYDDI FRLKGTAAKA DVFHILSGMW  300
KTPAERCFMW IGGFRSSELL KLLVSQLEPL TEQQLVGIYN LQQSSQQAED ALSQGMEALQ  360
QSLSETLASG SPAPSGSSGN VANYMGQMAM AMGKLGTLDG FLRQADNLRQ QTLQQMHRIL  420
TTRQSARALL AINDYFSRLR ALSSLWLARP RE*
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator that binds specifically to the DNA sequence 5'-TGACG-3'. Recognizes ocs elements like the as-1 motif of the cauliflower mosaic virus 35S promoter. Binding to the as-1-like cis elements mediate auxin- and salicylic acid-inducible transcription.
Cis-element ? help Back to Top
SourceLink
PlantRegMapPbr028659.1
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009338082.10.0PREDICTED: transcription factor TGA2.3-like
SwissprotO241600.0TGA21_TOBAC; TGACG-sequence-specific DNA-binding protein TGA-2.1
TrEMBLA0A314Y3B90.0A0A314Y3B9_PRUYE; Transcription factor HBP-1b(C38)
STRINGXP_009338082.10.0(Pyrus x bretschneideri)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF14703494
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G12250.21e-154TGACG motif-binding factor 6