PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pbr028081.1
Organism
Pyrus bretschneideri
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Pyrus
Family bZIP
Protein Properties Length: 505aa    MW: 54732.4 Da    PI: 6.1566
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pbr028081.1genomeCPETRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_130.86.4e-10383441563
                  CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
       bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                  kr++r   NR +A rs +RK  +i eLe kv++L++e ++L  +   l+  +  l+se+
  Pbr028081.1 383 KRAKRILANRQSAARSKERKMRYIIELEHKVQTLQTEATTLSAQFTLLQRDSMGLTSEN 441
                  9*****************************************99999998888888776 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003383.1E-17379443IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1701.7E-8380435No hitNo description
PROSITE profilePS5021710.45381444IPR004827Basic-leucine zipper domain
PfamPF001702.8E-8383441IPR004827Basic-leucine zipper domain
SuperFamilySSF579598.84E-11383434No hitNo description
CDDcd147031.25E-23384433No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 505 aa     Download sequence    Send to blast
MEGSDETGSA KQQRPNPAFG SSSFLVPKPN SNLDIPNFNP SQMGFRMSPE SSKRPGIPPS  60
HPNNHNSMPF SRPQSGSLPP LSSGSSHTRS MSQPPFFSLD SLPPLSPLTY REPSPPSLSD  120
PNSVDVSMGE SVVNSHGASL RSPVHDSTAY WAGDGRPPRR GHRRSNSDVS LGLSAISQPS  180
PQLIPVGHRT SLDESASGKP VQLMSQGSNG NAEGMDERKS GGEVVDDLFN AYMNLENIDQ  240
MNLSGNEDKD MDSRASGSKT NGGESSDNEV ESGLNGSRNG MPRPASGLPN ERREGLKRTA  300
SGDVVPNARH CRSISMDSYM ENLNFDDEPL KPLPVGQQSP STSLDGSSAK FSMEFGSGEF  360
NAVELKKIME NDKLAEIALS DPKRAKRILA NRQSAARSKE RKMRYIIELE HKVQTLQTEA  420
TTLSAQFTLL QRDSMGLTSE NNELKFRLQS LEQQAQLKDA LNEALTGEVQ RLKLAAAELG  480
GESHLSNHTQ QNTQPQQFVQ PQQN*
Cis-element ? help Back to Top
SourceLink
PlantRegMapPbr028081.1
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_018498731.10.0PREDICTED: transcription factor RF2a-like isoform X2
TrEMBLA0A498J7G70.0A0A498J7G7_MALDO; Uncharacterized protein
STRINGXP_009337667.10.0(Pyrus x bretschneideri)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF22723484
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38900.31e-102bZIP family protein