PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pbr028080.1
Organism
Pyrus bretschneideri
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Pyrus
Family bZIP
Protein Properties Length: 576aa    MW: 62899.4 Da    PI: 7.5047
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pbr028080.1genomeCPETRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_133.96.7e-11405463563
                  CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
       bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                  kr++r   NR +A rs +RK  +i+eLe kv++L++e ++L  +  +l+ e+ +l+se+
  Pbr028080.1 405 KRAKRILANRQSAARSKERKMRYIQELEHKVQTLQTEATTLSAQFTKLQRESVSLTSEN 463
                  9*******************************************************998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003385.9E-17401465IPR004827Basic-leucine zipper domain
PROSITE profilePS5021711.346403466IPR004827Basic-leucine zipper domain
SuperFamilySSF579594.15E-11405460No hitNo description
Gene3DG3DSA:1.20.5.1706.8E-11405461No hitNo description
PfamPF001705.2E-9405463IPR004827Basic-leucine zipper domain
CDDcd147038.75E-22406455No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0005829Cellular Componentcytosol
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 576 aa     Download sequence    Send to blast
MEGSDETGSA NKQQRPNPTF GSSSFSVPKP NSNLDIPNFN PSSQMGLPMR QSSPSLSPEN  60
SKRPGIPPSH PNNHNSMPFS NVMRPQSRSW QLGTQNLSPG SSHTRSLSQP PFFSLDSLPP  120
LSPLTYRDPS GPSLPDPNSV EVSMEETVVN SHGPSLRSPV ADSSAFWAGD GLPPRRGHRR  180
SNSDVPLGFS AVIQSSPQLI PIGRRTSLDG SASGRENSGI GKPNQLMRQG SNGNAEGMDE  240
RKSGGEVVDD LFNAYMNLEN IDKMNSSGNE DKDLDSRASG SKTNGGESSD NEVESGLNGN  300
GNGRQRPGSG FPSERREGLK RTASGDVVPI RHCRSISMDS YMENLNFDDE PLKPLPLGQQ  360
SPSTSLDGNS AKFNMEFGSG EFNAIELRKI MENEKLAEIA LSDPKRAKRI LANRQSAARS  420
KERKMRYIQE LEHKVQTLQT EATTLSAQFT KLQRESVSLT SENNELKFRL QALEQQAQLK  480
DALNEALTGE VQRLKLAAGE LSGGGGHLSN RMAHQLSLSQ QMLQLQHLNL YQMQQQPQHQ  540
AQQNTQPQQF MQQPQQNRPS HHQNGNAAAK PELSQ*
Cis-element ? help Back to Top
SourceLink
PlantRegMapPbr028080.1
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009337668.10.0PREDICTED: probable transcription factor PosF21 isoform X1
TrEMBLA0A498J7G70.0A0A498J7G7_MALDO; Uncharacterized protein
STRINGXP_009337668.10.0(Pyrus x bretschneideri)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF22723484
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38900.31e-115bZIP family protein