PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pbr025942.1
Organism
Pyrus bretschneideri
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Pyrus
Family ERF
Protein Properties Length: 161aa    MW: 17030.2 Da    PI: 8.6969
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pbr025942.1genomeCPETRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP247.83.6e-151967254
          AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkle 54
                 + kGVr++k +g+Wv+eIr+p +   r r +lg+f tae Aa a++    +l+
  Pbr025942.1 19 KLKGVRQRK-WGKWVSEIRVPGT---RDRLWLGTFSTAEAAAVARDVGYYCLR 67
                 679*****9.**********943...5*****************998888877 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008477.6E-81956IPR001471AP2/ERF domain
CDDcd000184.08E-221978No hitNo description
SMARTSM003803.1E-221984IPR001471AP2/ERF domain
PROSITE profilePS5103219.731978IPR001471AP2/ERF domain
SuperFamilySSF541714.71E-161979IPR016177DNA-binding domain
PRINTSPR003671.1E-82031IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.105.2E-232078IPR001471AP2/ERF domain
PRINTSPR003671.1E-84258IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0010200Biological Processresponse to chitin
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 161 aa     Download sequence    Send to blast
MSYSSEESGS TPCSTSNRKL KGVRQRKWGK WVSEIRVPGT RDRLWLGTFS TAEAAAVARD  60
VGYYCLRRPS TLEGLNFPLM LPSCVSDDMS PRSVQKAASD AGMAVDAQLI ANKSPPPQPA  120
GTGARVGAEG SFGCWHGSGC SADCQQVPAA AASWNWKQCA *
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapPbr025942.1
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_018497936.15e-85PREDICTED: ethylene-responsive transcription factor ERF020-like
SwissprotQ9C9I82e-42ERF20_ARATH; Ethylene-responsive transcription factor ERF020
TrEMBLA0A498JGG81e-80A0A498JGG8_MALDO; Uncharacterized protein
STRINGXP_009378943.12e-84(Pyrus x bretschneideri)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF54893054
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G71520.19e-45ERF family protein
Publications ? help Back to Top
  1. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]