PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pbr025857.1

Organism

Pyrus bretschneideri

Taxonomic ID

225117

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Pyrus

Family

NZZ/SPL

Protein Properties

Length: 455aa MW: 49294.9 Da PI: 7.499

Description

NZZ/SPL family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pbr025857.1	genome	CPETR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NOZZLE	21.7	3.3e-07	28	72	49	93
NOZZLE 49 sktaqqkqkkptlrgmgvaklerfiieeekkklvvatvgdtssva 93 s + + kqkk rg+gva+le+ ++ee++kk ++a++ t+ + Pbr025857.1 28 SSSKKTKQKKVPQRGLGVAQLEKIRLEEQQKKAAAAAILSTTPPS 72 445567899999*********************999887776444 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF08744	6.6E-5	28	69	IPR014855	Plant transcription factor NOZZLE

Sequence ? help Back to Top
Protein Sequence Length: 455 aa Download sequence Send to blast
MAHEEEQTQN TSTEIIGLGS NNIISSRSSS KKTKQKKVPQ RGLGVAQLEK IRLEEQQKKA 60 AAAAILSTTP PSSLPSPTKS SSYSCTSSVP IRHFYQPPSS IPFPSLDLPS PNSIFHPQFI 120 PSAHSGVDGR KPMISSGTVP FGVGNNNNNN NINGGGNGNH VPNLWNPCEF NILDQKVSCN 180 PGLDPGLAFR STMNLPFESS NNNSLWPLSN FPTRTQQFHH QQPPPPPPPP PPPPSMVNLS 240 TANSSSVLNL QIEPPSNQSY YSNCTPMWPD EEKMVGMKRP YPFSLENPPI PSIKLPTFVA 300 PPIRADEATS CGNRSAFNFD PAIKTNFREG PSCSTSISES NSRSSIKENG SVNGDFLTLA 360 PPSTSWTCPS PKLNLPPSYL AFHNREIPDF ESFHYQGNNA DDTIYQPGPS VPNPQQAFYS 420 FFPLAKAQNG RAATTLNNNC NGEVGESVDL NLKL*

Sequence ? help Back to Top

Protein Sequence Length: 455 aa Download sequence Send to blast

MAHEEEQTQN TSTEIIGLGS NNIISSRSSS KKTKQKKVPQ RGLGVAQLEK IRLEEQQKKA  60
AAAAILSTTP PSSLPSPTKS SSYSCTSSVP IRHFYQPPSS IPFPSLDLPS PNSIFHPQFI  120
PSAHSGVDGR KPMISSGTVP FGVGNNNNNN NINGGGNGNH VPNLWNPCEF NILDQKVSCN  180
PGLDPGLAFR STMNLPFESS NNNSLWPLSN FPTRTQQFHH QQPPPPPPPP PPPPSMVNLS  240
TANSSSVLNL QIEPPSNQSY YSNCTPMWPD EEKMVGMKRP YPFSLENPPI PSIKLPTFVA  300
PPIRADEATS CGNRSAFNFD PAIKTNFREG PSCSTSISES NSRSSIKENG SVNGDFLTLA  360
PPSTSWTCPS PKLNLPPSYL AFHNREIPDF ESFHYQGNNA DDTIYQPGPS VPNPQQAFYS  420
FFPLAKAQNG RAATTLNNNC NGEVGESVDL NLKL*

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Pbr025857.1

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_008367791.2	0.0	verprolin-like
TrEMBL	A0A498KAW4	0.0	A0A498KAW4_MALDO; Uncharacterized protein
STRING	XP_008367791.1	0.0	(Malus domestica)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF8956	12	13