PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pbr025302.1
Organism
Pyrus bretschneideri
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Pyrus
Family ERF
Protein Properties Length: 165aa    MW: 18047.8 Da    PI: 7.7611
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pbr025302.1genomeCPETRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2361.7e-1149782255
          AP2 22 psengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                 +    k++r +lg+++taeeAa+a+++a+++l+g
  Pbr025302.1 49 W----KKTRKWLGTYDTAEEAARAYDEAALSLRG 78
                 3....359************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5103213.6832786IPR001471AP2/ERF domain
SMARTSM003801.8E-112992IPR001471AP2/ERF domain
CDDcd000181.74E-184785No hitNo description
SuperFamilySSF541711.9E-124786IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.103.9E-184786IPR001471AP2/ERF domain
PfamPF008471.9E-75078IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 165 aa     Download sequence    Send to blast
MSTVDALHLR DTALSLAVEP PSPPPRKLRA QPRHASPDSE GGXXXXDPWK KTRKWLGTYD  60
TAEEAARAYD EAALSLRGSK AKTNFGNLAL APPHSLLLGG GSEMLWPPPL MYVMTGAPAV  120
APVRSEYTGY MLENVDVMVG EEEKKMRKEK KPFLFDLNLP APLF*
Cis-element ? help Back to Top
SourceLink
PlantRegMapPbr025302.1
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009354898.19e-95PREDICTED: ethylene-responsive transcription factor 8-like
TrEMBLA0A498JX379e-84A0A498JX37_MALDO; Uncharacterized protein
STRINGXP_009354898.13e-94(Pyrus x bretschneideri)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF33034189