PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pbr024746.1

Organism

Pyrus bretschneideri

Taxonomic ID

225117

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Pyrus

Family

bZIP

Protein Properties

Length: 303aa MW: 33816.2 Da PI: 5.5361

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pbr024746.1	genome	CPETR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	46.6	7.2e-15	252	295	5	48
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkke 48 +r++r++kNRe+A rsR+RK+a++ eLe+kv Le+eN++L+k+ Pbr024746.1 252 RRQKRMIKNRESAARSRARKQAYTNELENKVSRLEEENERLRKQ 295 79****************************************85 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.20.5.170	3.1E-15	241	295	No hit	No description
SMART	SM00338	3.1E-9	248	302	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	11.76	250	295	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	1.0E-10	252	295	No hit	No description
CDD	cd14707	4.29E-23	252	302	No hit	No description
Pfam	PF00170	1.6E-12	252	295	IPR004827	Basic-leucine zipper domain
PROSITE pattern	PS00036	0	255	270	IPR004827	Basic-leucine zipper domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 303 aa Download sequence Send to blast
MGIQTMGSQG GADGNCKQSQ FQPLPRQNSI YSLTLDEVQN QLGDLGKPLS SMNLDELLKN 60 VWSAEANQIM GIDIEGTTLV NQSQLQRQAS LSLTSALSKK TVDEVWKDIQ QSKDEEEQKS 120 QERQRTLGEM TLEDFLVKAG VVAEAEASSD KKYADPLVGV DANVAAQLSQ GQWMQYPQPQ 180 YQHPQQSMMG VYMPSQPLPP PMHVGAGAMM EVPYPDNQVA VPSPLMGTLS DTQTPGRKRG 240 NPEDIVEKTV ERRQKRMIKN RESAARSRAR KQAYTNELEN KVSRLEEENE RLRKQKVRFL 300 LV*

Functional Description ? help Back to Top
Source	Description
UniProt	Binds to the embryo specification element and the ABA-responsive element (ABRE) of the Dc3 gene promoter. Could participate in abscisic acid-regulated gene expression during seed development.

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Pbr024746.1

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	AY786307	0.0	AY786307.1 Malus x domestica bZIP transcription factor (ZIP1) mRNA, complete cds.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_009355069.1	0.0	PREDICTED: ABSCISIC ACID-INSENSITIVE 5-like protein 2 isoform X1
Refseq	XP_009355070.1	0.0	PREDICTED: ABSCISIC ACID-INSENSITIVE 5-like protein 2 isoform X1
Refseq	XP_018502725.1	0.0	PREDICTED: ABSCISIC ACID-INSENSITIVE 5-like protein 2 isoform X1
Swissprot	Q9LES3	6e-83	AI5L2_ARATH; ABSCISIC ACID-INSENSITIVE 5-like protein 2
TrEMBL	D9ZIQ3	0.0	D9ZIQ3_MALDO; BZIP domain class transcription factor
STRING	XP_009355069.1	0.0	(Pyrus x bretschneideri)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF1320	34	105

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G56850.1	2e-65	ABA-responsive element binding protein 3

Publications ? help Back to Top
Kim H, et al. ABA-HYPERSENSITIVE BTB/POZ PROTEIN 1 functions as a negative regulator in ABA-mediated inhibition of germination in Arabidopsis. Plant Mol. Biol., 2016. 90(3): p. 303-15 [PMID:26667153] Song C,Kim T,Chung WS,Lim CO The Arabidopsis Phytocystatin AtCYS5 Enhances Seed Germination and Seedling Growth under Heat Stress Conditions. Mol. Cells, 2017. 40(8): p. 577-586 [PMID:28756655]