PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pbr023279.1
Organism
Pyrus bretschneideri
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Pyrus
Family bZIP
Protein Properties Length: 225aa    MW: 23864.2 Da    PI: 10.2051
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pbr023279.1genomeCPETRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_124.65.5e-08188208626
                  HHHCHHHHHHHHHHHHHHHHH CS
       bZIP_1   6 rerrkqkNReAArrsRqRKka 26 
                  r +r++kNRe+A rsR+RK+a
  Pbr023279.1 188 RHKRMIKNRESAARSRARKQA 208
                  78******************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd147072.67E-14188211No hitNo description
Gene3DG3DSA:1.20.5.1703.8E-6188210No hitNo description
SuperFamilySSF579592.81E-5188211No hitNo description
PROSITE patternPS000360190205IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 225 aa     Download sequence    Send to blast
MLSSNGSDQT NLNTTGTSSR SSSSSPSPVS PPSSFQTPQR TMEEVWKDIN LASLTESTTQ  60
IRSSSSSSPL LHGNLPNGTH RHHPNCRNMT LQEFLAKPFA HDSPAAATAL VSSAVSPPSP  120
LPSSSLRPPR SGFIDHHQLN PNNLSSSVSN SFSGCPFESL AASSSGLPSF GNRSFTESDH  180
SNSGGDGRHK RMIKNRESAA RSRARKQACT SPIFFPIIPF LSSD*
Cis-element ? help Back to Top
SourceLink
PlantRegMapPbr023279.1
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKU3194340.0KU319434.1 Eriobotrya deflexa FD1 mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009379337.11e-146PREDICTED: protein FD-like
TrEMBLA0A498KFI71e-105A0A498KFI7_MALDO; Uncharacterized protein
STRINGXP_009379337.11e-145(Pyrus x bretschneideri)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF37553252
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G17770.12e-11basic region/leucine zipper motif 27