PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pbr023047.1
Organism
Pyrus bretschneideri
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Pyrus
Family ERF
Protein Properties Length: 133aa    MW: 14748.3 Da    PI: 5.0032
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pbr023047.1genomeCPETRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP263.44.7e-201060255
          AP2  2 gykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkkleg 55
                 +y+GVr+++ +g+++AeIrd    + +++r++lg+f taeeAa+a+++a+ +++g
  Pbr023047.1 10 RYRGVRRRP-WGKYAAEIRDT---NrHSARVWLGTFNTAEEAARAYDRAAYAMRG 60
                 6********.**********4...4356*************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000185.77E-181069No hitNo description
Gene3DG3DSA:3.30.730.108.6E-311070IPR001471AP2/ERF domain
PfamPF008474.8E-161060IPR001471AP2/ERF domain
SuperFamilySSF541717.19E-231069IPR016177DNA-binding domain
SMARTSM003803.1E-331074IPR001471AP2/ERF domain
PROSITE profilePS5103223.6571068IPR001471AP2/ERF domain
PRINTSPR003677.4E-121122IPR001471AP2/ERF domain
PRINTSPR003677.4E-123450IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 133 aa     Download sequence    Send to blast
MEEKEAREVR YRGVRRRPWG KYAAEIRDTN RHSARVWLGT FNTAEEAARA YDRAAYAMRG  60
GLAILNFPNE YPSASGGSSS ASANFLSSSP AMPGTMQGRA GGEQNEVLVL EYLDDRLLEE  120
LLDCDNQKNN QE*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A1e-3210761480Ethylene-responsive transcription factor ERF096
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapPbr023047.1
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009379023.12e-93PREDICTED: ethylene-responsive transcription factor ERF095
SwissprotQ9LTC53e-38ERF98_ARATH; Ethylene-responsive transcription factor ERF098
TrEMBLA0A498I3E92e-68A0A498I3E9_MALDO; Uncharacterized protein
STRINGXP_009379023.18e-93(Pyrus x bretschneideri)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF2276124
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23220.14e-18ERF family protein
Publications ? help Back to Top
  1. Van den Broeck L, et al.
    From network to phenotype: the dynamic wiring of an Arabidopsis transcriptional network induced by osmotic stress.
    Mol. Syst. Biol., 2017. 13(12): p. 961
    [PMID:29269383]