PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pbr021351.1
Organism
Pyrus bretschneideri
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Pyrus
Family bHLH
Protein Properties Length: 309aa    MW: 35004.6 Da    PI: 4.6062
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pbr021351.1genomeCPETRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH26.51.2e-08184225854
                  HHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
          HLH   8 rErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                  + r RR+ri ++ +eL +l+P a     +K++ ae+L+ A +Y+k L
  Pbr021351.1 184 AARERRRRITDKTQELGRLIPGA-----TKMNTAEMLQAAYKYVKFL 225
                  6699******************9.....9****************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088812.671176225IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474596.8E-11180234IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.107.7E-11181234IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.1E-8182231IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000102.6E-6184225IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000838.69E-4190230No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 309 aa     Download sequence    Send to blast
MAMSTATFCP TDDWGSVQLL NPPEMNMLSF PSQQELQAAS SGIFGLQDYY YSLANINPDD  60
TCIDPLFQPY ESSENFFHPD FCSPTDNMNL ASLSPEICPT LDEYDYSYQA YPKRQKLFHD  120
QQVQYYNSNF PIATPNYFNA YDRFLQPEIL VPTPEIQIQN PPAAAKLNNK AVSGTGTVSP  180
QSIAARERRR RITDKTQELG RLIPGATKMN TAEMLQAAYK YVKFLRAQVS VLKLMTDSPI  240
QQERKEEGLH INQERLQVVA SPIVQEKLYS EEKCLVLKEF VEVLAKDDDI QSKPLLKDKF  300
AELLQTNG*
Cis-element ? help Back to Top
SourceLink
PlantRegMapPbr021351.1
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009354039.10.0PREDICTED: transcription factor bHLH53
TrEMBLA0A498IUM60.0A0A498IUM6_MALDO; Uncharacterized protein
STRINGXP_009354039.10.0(Pyrus x bretschneideri)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF34593065
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G30670.14e-25bHLH family protein