PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pbr021041.1
Organism
Pyrus bretschneideri
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Pyrus
Family bZIP
Protein Properties Length: 424aa    MW: 45169.4 Da    PI: 9.0749
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pbr021041.1genomeCPETRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_170.32.9e-22281343163
                  XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
       bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                  ++e+krerrkq+NRe+ArrsR+RK+ae+eeL++kv++L+a N aLk+e+++l++++a+l+ e+
  Pbr021041.1 281 DREIKRERRKQSNRESARRSRLRKQAETEELARKVEALSADNVALKSEINRLTENSATLRLEN 343
                  689*******************************************************99887 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF077773.9E-31199IPR012900G-box binding protein, multifunctional mosaic region
PfamPF165964.5E-26130262No hitNo description
Gene3DG3DSA:1.20.5.1701.5E-17275340No hitNo description
SMARTSM003386.2E-21281345IPR004827Basic-leucine zipper domain
PfamPF001702.0E-20282343IPR004827Basic-leucine zipper domain
PROSITE profilePS5021712.898283346IPR004827Basic-leucine zipper domain
SuperFamilySSF579599.38E-11284340No hitNo description
CDDcd147021.50E-20286334No hitNo description
PROSITE patternPS000360288303IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009737Biological Processresponse to abscisic acid
GO:0005829Cellular Componentcytosol
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0044212Molecular Functiontranscription regulatory region DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 424 aa     Download sequence    Send to blast
MGNDDDAKSV KSEKSYSPLL ADQANPNNHT NMHVYPDWAA MQAYYGPRVA LPPYYNSAMA  60
SGHPPHPYMW PPPQHMMPPY GAPYAVYSHG GVYAHPAVPL ASHGQGGPSS PAAATPLNME  120
TPTKSSGNTD RGLMKKLKGF DGLAMSIGSG NVMNAEGGAE RSLSQSSGTE GSSNGSDGNT  180
AAANQTRRKR SREGTPATAG EGKTDMQPGP AEEASAATDK VLGVTLAAVG IPGKLVGPAV  240
SPGMTTALEL KNLPILNSKT SPTTVPQSCA VLPPETWIHN DREIKRERRK QSNRESARRS  300
RLRKQAETEE LARKVEALSA DNVALKSEIN RLTENSATLR LENTTLLDKL KNARVGRMED  360
IIMNIDDKRV QPFSTENLLS RVNNAGSIAR DAEKDSDAYE KNNGTKLHQL LDASPRADAV  420
AAG*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1297303RRSRLRK
2297304RRSRLRKQ
Functional Description ? help Back to Top
Source Description
UniProtBinds to the G-box-like motif (5'-ACGTGGC-3') of the chalcone synthase (CHS) gene promoter. G-box and G-box-like motifs are defined in promoters of certain plant genes which are regulated by such diverse stimuli as light-induction or hormone control.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00318DAPTransfer from AT2G46270Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapPbr021041.1
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: By light.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMap-Retrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009377247.10.0PREDICTED: common plant regulatory factor 1 isoform X2
SwissprotQ990891e-149CPRF1_PETCR; Common plant regulatory factor 1
TrEMBLA0A498KJZ80.0A0A498KJZ8_MALDO; Uncharacterized protein
STRINGXP_009377245.10.0(Pyrus x bretschneideri)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF53013455
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46270.11e-106G-box binding factor 3
Publications ? help Back to Top
  1. Weisshaar B,Armstrong GA,Block A,da Costa e Silva O,Hahlbrock K
    Light-inducible and constitutively expressed DNA-binding proteins recognizing a plant promoter element with functional relevance in light responsiveness.
    EMBO J., 1991. 10(7): p. 1777-86
    [PMID:2050115]
  2. Feldbrügge M,Hahlbrock K,Weisshaar B
    The transcriptional regulator CPRF1: expression analysis and gene structure.
    Mol. Gen. Genet., 1996. 251(6): p. 619-27
    [PMID:8757392]