PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pbr020079.1
Organism
Pyrus bretschneideri
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Pyrus
Family NAC
Protein Properties Length: 365aa    MW: 40958.4 Da    PI: 5.3367
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pbr020079.1genomeCPETRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM61.52.7e-19151268128
          NAM   8 hPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeek..ewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelvglk 103
                  + tdeel    L+k ++g++l+  +vi++v+ y++ P++Lp  ++  ++    ++F++++++++        t+ g W+a+g+  +++s ++++ g +
  Pbr020079.1  15 QCTDEELC-MSLEKILDGSPLPG-NVIRDVNPYRCAPSNLPGYFSCPSNgyGFWYFIRSSESNP--------TNIGQWRAKGEASRIFS-NSSVYGWR 101
                  669****9.56***********9.99***************64444333125556666655443........6789*************.999***** PP

          NAM 104 ktLvfykgrapkgektdWvmheyrl 128
                   tL fy+ +ap+ +kt+Wvm+ey +
  Pbr020079.1 102 ATLEFYQCQAPHETKTNWVMQEYWI 126
                  ***********************75 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100525.2688149IPR003441NAC domain
PfamPF023652.0E-815124IPR003441NAC domain
SuperFamilySSF1019413.4E-2717148IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 365 aa     Download sequence    Send to blast
MYPQSAALPA DISLQCTDEE LCMSLEKILD GSPLPGNVIR DVNPYRCAPS NLPGYFSCPS  60
NGYGFWYFIR SSESNPTNIG QWRAKGEASR IFSNSSVYGW RATLEFYQCQ APHETKTNWV  120
MQEYWITQKK SSESSKLKDV WSLCRVFLGD DETPNSNKLQ ELVNSDRASH STHSVVPRVE  180
DRGSTSKPRV ENEASNDRET GTLVVTERLP VRDDNVQIMH ENDYLSRGDY LELLDLDTPA  240
SHSFSSVSSC LTMSSDECFD SLALLEELEP KSKQELVTNN NELVVLASSS GSFDKSRDEE  300
RIRNRSPNPG SSVYAKIVTE NSSKNVSRKQ KSDDRNEGPS NSQNANVGGT KKLKRKKYFC  360
FMPF*
Cis-element ? help Back to Top
SourceLink
PlantRegMapPbr020079.1
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009364422.10.0PREDICTED: NAC domain-containing protein 74-like isoform X4
TrEMBLD9ZJ890.0D9ZJ89_MALDO; NAC domain class transcription factor
STRINGXP_009364403.10.0(Pyrus x bretschneideri)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF105882235
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G65910.12e-22NAC domain containing protein 28