PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pbr019660.1
Organism
Pyrus bretschneideri
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Pyrus
Family bHLH
Protein Properties Length: 234aa    MW: 25851.4 Da    PI: 6.7316
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pbr019660.1genomeCPETRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH41.91.8e-133278555
                 HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
          HLH  5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
                 h   Er RR++++s f++L  llP++      K +K++i+ +A++YIksL+
  Pbr019660.1 32 HTWTERGRRKKMRSMFSNLHALLPQL----PAKADKSTIVDEAIRYIKSLE 78
                 6778*********************6....39*****************96 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474596.15E-152587IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088814.0052777IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000837.32E-143282No hitNo description
PfamPF000101.0E-103278IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.2E-133287IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003533.4E-93383IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 234 aa     Download sequence    Send to blast
MEQKEVVIKE SSGKVGGRDR DGGGDESDHV VHTWTERGRR KKMRSMFSNL HALLPQLPAK  60
ADKSTIVDEA IRYIKSLEHT LQTTQTQGLD KFSALTVSNT ELTCDTREAF LADHFHQGPP  120
TSNNLALPAS LFPPPASFQT WFSPNFVMNM NGNDAQISVC SPPKPGLLTT MFYILEKHKL  180
DVVSAHVSSD RCHCMYMIHA HAGGACDNFP EALSVEYIFK LAAGEMNLWL LSC*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
11523GGRDRDGGG
Cis-element ? help Back to Top
SourceLink
PlantRegMapPbr019660.1
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009365269.21e-177PREDICTED: transcription factor bHLH95
TrEMBLA0A498HV621e-120A0A498HV62_MALDO; Uncharacterized protein
STRINGXP_009365269.11e-177(Pyrus x bretschneideri)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF47733358
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G49770.18e-41bHLH family protein