PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pbr019461.1
Organism
Pyrus bretschneideri
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Pyrus
Family bZIP
Protein Properties Length: 307aa    MW: 33891.1 Da    PI: 9.1369
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pbr019461.1genomeCPETRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_144.43.5e-14224271350
                  XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
       bZIP_1   3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkele 50 
                  + +r+rr++kNRe+A rsR+RK+a++ eLe  +  Le+eN++L ke  
  Pbr019461.1 224 AQQRQRRMIKNRESAARSRERKQAYQVELESLAVRLEEENEQLLKEQA 271
                  679***************************************998854 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1705.4E-13218282No hitNo description
SMARTSM003385.9E-11222286IPR004827Basic-leucine zipper domain
PfamPF001701.5E-12224270IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.542224269IPR004827Basic-leucine zipper domain
CDDcd147073.51E-18226270No hitNo description
SuperFamilySSF579591.44E-9227271No hitNo description
PROSITE patternPS000360229244IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 307 aa     Download sequence    Send to blast
MSSLSSRSRN SDLSRRPSSN FSSATKPKPT TTTAHPSSSS AHPQSLNNYQ NSNTSTTPAL  60
PIGSMTVDGL LYDSNPTPMT DATLFNAQIT LLDSSAEINS STAPPPKTVD EVWREIVSGE  120
CRKECKEEVP DEMMTLEDFL ARAGAVEEND IKDFPLAPPP PETERLSSGV FSFDQIPLSP  180
FGSIDKVEGS IVRFGNGPDP AGSGGGVGRR KRGRAVMEPM DKAAQQRQRR MIKNRESAAR  240
SRERKQAYQV ELESLAVRLE EENEQLLKEQ AGRTQARLKQ LMENIIPVVE KRRPPRVLRR  300
VRSLQW*
Functional Description ? help Back to Top
Source Description
UniProtBinds to the G-box motif (5'-CCACGTGG-3') of the rbcS-1A gene promoter. G-box and G-box-like motifs are cis-acting elements defined in promoters of certain plant genes which are regulated by such diverse stimuli as light-induction or hormone control. {ECO:0000269|PubMed:8146148}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapPbr019461.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_018507406.10.0PREDICTED: G-box-binding factor 4-like isoform X1
RefseqXP_018507407.10.0PREDICTED: G-box-binding factor 4-like isoform X2
SwissprotP427775e-60GBF4_ARATH; G-box-binding factor 4
TrEMBLA0A498IQR61e-180A0A498IQR6_MALDO; Uncharacterized protein
STRINGXP_009376578.10.0(Pyrus x bretschneideri)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF20283481
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G44080.16e-46bZIP family protein