PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pbr018064.1
Organism
Pyrus bretschneideri
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Pyrus
Family GeBP
Protein Properties Length: 394aa    MW: 43007.9 Da    PI: 4.5558
Description GeBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pbr018064.1genomeCPETRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF57385.19.5e-27159255298
       DUF573   2 lfqrlwseeDeivlLqGlidfkaktgkspsddidafyefvkksisfkvsksqlve....KirrLKkKfkkkvkkaksgkepsfskehdqkifelskki 95 
                  + qr wse+Dei++L+G+i+f++k+g+ +s+++  f ef+k+ ++++ s +qlve    KirrLKkK++  ++       p+f k+h+ k+fel+kk 
  Pbr018064.1 159 KGQRFWSEDDEITILKGIIEFESKKGVAASSNVATFLEFIKNDLQVDLSIDQLVEkltdKIRRLKKKYQAGEDG----GGPVFLKPHELKCFELCKKN 252
                  569************************************************9875222279*******986655....899***************** PP

       DUF573  96 Wgs 98 
                  Wgs
  Pbr018064.1 253 WGS 255
                  *85 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF045049.6E-24161254IPR007592Protein of unknown function DUF573
Sequence ? help Back to Top
Protein Sequence    Length: 394 aa     Download sequence    Send to blast
MAPKKLAEGP PAAVVEDSDD ETVDEEEEEE DDAVEVSKAK SVDLNDDDLE EEEEEEEEEE  60
MPSAAVTKSN PQSGSASEDD SGSGSETESD NHSPSASDFT VKPIVSKPAN NAVMPSKKTA  120
SAKPVAAPNS GSKRPAETEA NPKNSKKKKV GGDDEDAKKG QRFWSEDDEI TILKGIIEFE  180
SKKGVAASSN VATFLEFIKN DLQVDLSIDQ LVEKLTDKIR RLKKKYQAGE DGGGPVFLKP  240
HELKCFELCK KNWGSEANGL DSNVKGGKRK PPRKNNKVNN DTVLALPVSD VSVKKEVQDN  300
VTNRGVKADP DDFWSKYPCL SGSLRTGNCA PRLDLTRLLI EKMPALVGSS KAKELEERWR  360
ALQLIEMDLS VKKLDLMQEQ TKLVSDSMKS LKD*
Cis-element ? help Back to Top
SourceLink
PlantRegMapPbr018064.1
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009353235.10.0PREDICTED: STOREKEEPER protein-like
TrEMBLA0A498J4090.0A0A498J409_MALDO; Uncharacterized protein
STRINGXP_009353235.10.0(Pyrus x bretschneideri)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF139661119
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G00390.13e-23DNA-binding storekeeper protein-related transcriptional regulator