PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pbr018063.2
Organism
Pyrus bretschneideri
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Pyrus
Family GeBP
Protein Properties Length: 315aa    MW: 35097.6 Da    PI: 4.8523
Description GeBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pbr018063.2genomeCPETRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF57396.82e-3080176298
       DUF573   2 lfqrlwseeDeivlLqGlidfkaktgkspsddidafyefvkksisfkvsksqlve....KirrLKkKfkkkvkkaksgkepsfskehdqkifelskki 95 
                  + qr wse+Dei++L+G+i+f++k+g+ +s+++  f ef+k+ ++++ s +qlve    KirrLKkK++  ++    g++p+fsk+h+ k+fel+kki
  Pbr018063.2  80 KGQRFWSEDDEITILKGIIEFESKKGVAASSNVATFLEFIKNDLQVDLSIDQLVEkltdKIRRLKKKYQAGED----GEDPVFSKPHELKCFELCKKI 173
                  569************************************************9875222279*******87655....5******************** PP

       DUF573  96 Wgs 98 
                  Wgs
  Pbr018063.2 174 WGS 176
                  *95 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF045046.6E-2782175IPR007592Protein of unknown function DUF573
Sequence ? help Back to Top
Protein Sequence    Length: 315 aa     Download sequence    Send to blast
MAPKKLAEDP PPAVVEDSDD ETIDEEEEEE DDAVEQEDCF GEAGGRAQFR VEATGGGRAE  60
PKPKNSKKKK VGGDDEDAKK GQRFWSEDDE ITILKGIIEF ESKKGVAASS NVATFLEFIK  120
NDLQVDLSID QLVEKLTDKI RRLKKKYQAG EDGEDPVFSK PHELKCFELC KKIWGSEANG  180
LDSNVKGGKR KPLRKNNKVN NDTVLALPVS DVSVKKEVQN NVTNRGVKAD QDDFWSKYPC  240
LSGSLRTGNC APRSDLTRLL IEKMPSLVGS SKAKELEERW RVLQLIEMDL SVKKLDLIQE  300
QTKLVLDSMK SLKD*
Cis-element ? help Back to Top
SourceLink
PlantRegMapPbr018063.2
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008365444.11e-175STOREKEEPER protein-like
TrEMBLA0A498J4091e-173A0A498J409_MALDO; Uncharacterized protein
STRINGXP_008365444.11e-174(Malus domestica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF139661119
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G00390.14e-25DNA-binding storekeeper protein-related transcriptional regulator