PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pbr016593.1
Organism
Pyrus bretschneideri
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Pyrus
Family G2-like
Protein Properties Length: 289aa    MW: 32446.7 Da    PI: 9.7582
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pbr016593.1genomeCPETRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like82.93.5e-26173226255
      G2-like   2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                  +r+ Wt eL +rF+ea++ LGG+++AtPk+i  +m+v+gLt ++vkSHLQkYRl
  Pbr016593.1 173 KRRSWTLELQARFLEAMSLLGGPQEATPKQIQAVMQVDGLTHDQVKSHLQKYRL 226
                  799**************************************************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129412.697169229IPR017930Myb domain
SuperFamilySSF466891.2E-14170229IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.603.6E-23171228IPR009057Homeodomain-like
TIGRFAMsTIGR015571.5E-23172227IPR006447Myb domain, plants
PfamPF002491.2E-6174225IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 289 aa     Download sequence    Send to blast
MASSNHLELT LSLKLANIEN VSQKLSVLNE HLQKHQEELR KLEAFRTEMP HSVLLLSDAV  60
QVLKNEILEL SDHQSERRSA FRKYKSSSPP FNLKPYGIDT TDHKQVMTFQ CSQSSSQMGM  120
MVNKEPTSPT PFPCDLNMAA EDFELESKPQ AQPESQPQHQ LPLPLALPNL KNKRRSWTLE  180
LQARFLEAMS LLGGPQEATP KQIQAVMQVD GLTHDQVKSH LQKYRLNNRG VQPASATSGQ  240
RAPHFYRDYW QQQQQLDASN GGVRVGVGSS NGGRRSTDIP NKKAKTSR*
Cis-element ? help Back to Top
SourceLink
PlantRegMapPbr016593.1
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009373817.10.0PREDICTED: myb family transcription factor EFM-like
TrEMBLA0A498HDE21e-131A0A498HDE2_MALDO; Uncharacterized protein
STRINGXP_009373817.10.0(Pyrus x bretschneideri)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF148661012
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G03500.16e-22G2-like family protein